Gene Information

Name : RUM_04520 (RUM_04520)
Accession : YP_007828691.1
Strain : Ruminococcus champanellensis 18P13
Genome accession: NC_021039
Putative virulence/resistance : Resistance
Product : Acetyltransferase (isoleucine patch superfamily)
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 497518 - 498147 bp
Length : 630 bp
Strand : -
Note : -

DNA sequence :

ATGAAAAACAAAGTCTACCCCCGTCCCCACGATAAGCAGATCGTGTATCTGAAGGACGTGATCACAAAGCCAAATATCGA
AGTCGGCGACTATACGATCTACAACGATTTCGTCCACGATCCCTGTGATTTTGAGAAGAACAATGTGCTGTATCACTACC
CTGTCAACGGGGATAAACTGAAAATCGGAAAATTCTGCTCCATCGCCTGCGGCGCAAAATTTCTGTTTACCAGCGGAAAC
CATTCCATGCAGTCCCTGTCTACCTACACTTTCCCCATTTTCTTTGACGAGTGGGATCTGGATGCGAAAAACATCTGTGC
CGCATGGGACAACAAGGGCGACACTATAATCGGCAACGATGTGTGGATCGGCTATGAGGCAGTCATCATGCCGGGCGTAA
AAATCGGTGACGGTGCAATCATCGGTACGCATGCTGTAGTAACAAAGGATGTGCCACCCTACACCATTGTGGGTGGCGTT
CCCGCAAAGCCCATCCGCAAGCGATTTGACGATGCAACCATCGAGAAGCTGGAAGCCCTGCGCTGGTGGGATTGGAACGA
GAAAAAAATAAAGCGTAATATCTCTGCGATTCAATCGGGAGATCTTGCAGCTTTGGAGCGTGCAGAATGA

Protein sequence :

MKNKVYPRPHDKQIVYLKDVITKPNIEVGDYTIYNDFVHDPCDFEKNNVLYHYPVNGDKLKIGKFCSIACGAKFLFTSGN
HSMQSLSTYTFPIFFDEWDLDAKNICAAWDNKGDTIIGNDVWIGYEAVIMPGVKIGDGAIIGTHAVVTKDVPPYTIVGGV
PAKPIRKRFDDATIEKLEALRWWDWNEKKIKRNISAIQSGDLAALERAE

• Homologs from PAI DB

Gene	GenBank Accn	Product	Virulance or Resistance	PAI or REI	Alignment Type	E-val	Identity
catB8	YP_005797132.1	chloramphenicol acetyltransferase	Not tested	AbaR4e	Protein	2e-28	46
catB3	AET25385.1	chloramphenicol acetyltransferase	Not tested	PAGI-2(C)	Protein	2e-28	45
catB3	AFG30108.1	chloramphenicol acetyltransferase	Not tested	PAGI-2	Protein	2e-28	45

• Homologs from CARD and BacMet (resistance genes)

Gene	GenBank Accn	Product	ID of source DB	Alignment Type	E-val	Identity
RUM_04520	YP_007828691.1	Acetyltransferase (isoleucine patch superfamily)	AM180355.1.gene2499.	Protein	1e-70	73
RUM_04520	YP_007828691.1	Acetyltransferase (isoleucine patch superfamily)	NC_002516.2.878374.p	Protein	3e-27	48
RUM_04520	YP_007828691.1	Acetyltransferase (isoleucine patch superfamily)	JF268688.1.gene6.p01	Protein	3e-29	46
RUM_04520	YP_007828691.1	Acetyltransferase (isoleucine patch superfamily)	AY123251.gene2.p01	Protein	6e-29	46
RUM_04520	YP_007828691.1	Acetyltransferase (isoleucine patch superfamily)	AF322577.2.gene4.p01	Protein	9e-29	45
RUM_04520	YP_007828691.1	Acetyltransferase (isoleucine patch superfamily)	AY740681.1.gene5.p01	Protein	9e-29	45
RUM_04520	YP_007828691.1	Acetyltransferase (isoleucine patch superfamily)	CP001581.1.gene990.p	Protein	1e-32	43
RUM_04520	YP_007828691.1	Acetyltransferase (isoleucine patch superfamily)	NC_011595.7057349.p0	Protein	4e-19	41
RUM_04520	YP_007828691.1	Acetyltransferase (isoleucine patch superfamily)	NC_010410.6000796.p0	Protein	4e-19	41
RUM_04520	YP_007828691.1	Acetyltransferase (isoleucine patch superfamily)	NC_011586.7045146.p0	Protein	1e-19	41