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Name : RUM_23880 (RUM_23880) Accession : YP_007830385.1 Strain : Ruminococcus champanellensis 18P13 Genome accession: NC_021039 Putative virulence/resistance : Unknown Product : thymidine phosphorylase Function : - COG functional category : - COG ID : - EC number : 2.4.2.4 Position : 2538502 - 2539821 bp Length : 1320 bp Strand : - Note : - DNA sequence : ATGCGTGCATATGATCTGATTATGAAAACCCGGCGGGGGGAGCCGTTGACCGGGGCGGAGATCCGCTTTCTGGTCAGCGG CTGCGTGTCCGGGGACATTCCGGACTATCAGCTTTCCGCCTGGCTGATGGCGGTGTGCTTTCAGTCCCTGACCCCGGCGG AGACCCTGGAGCTGACCCTTGCCATGCGGGATTCCGGAGACCGGATGGATCTGTCCGGGATCCACGGCACCACAGCCGAC AAGCACAGCACCGGCGGGGTGGGGGATAAGACTACGCTGATCCTGGCGCCGGTGGTTGCCGCATGCGGCGGCTATGTGCC GAAAATGTCCGGCAGGGGGCTGGGCCACACCGGAGGCACCATCGACAAGCTGGAGAGCATTCCGGGCTTTTCCACCGCCA TTCCCTACGACCGGTTCATTGACACGGTGAACCGGGCAGGCTGCGCCGTGGTGGCACAGAGCGGCCATCTGGTGCCGGCG GACAAGAAGCTGTATGCTCTGCGGGATCTGACCGCTACGGTGGACAGCATCCCCCTGATCTGCGCCAGCATCATGAGCAA GAAGCTTGCCATGGGGGCGGACTGCATCCTGCTGGACGTAAAAACCGGCAGCGGCGCCTTTATGAAAACGGAGCAGGAGG CGGTGCAGCTGGGGGAGGCTATGGTGCGCACCGCAAAGCTTGCCGGGAAGCGATGCCGGGCGGTGGTGACGGATATGGAT ATGCCCCTGGGCAGTGCCGTGGGCAACGCCATCGAGGTGGCGGAGGCCATTTCCGTCTTGCAGGGACAGCGGCACACGGC ACTGGGAAAACTGAGCCTGACTTTGGCTGCCCACATGCTCACCATGTGCGGCAGGGGCACCCTGGAGCAGTGCCTGGCAG CGGCGGAGCAGGCAGTGGATTCCGGCACCGCACTGGAGCGGTTTGCCTGGATGCTGCAATGCCAGGGGGGCGATCCGGCA GTGGCGGAGCATCCGGAGCGGCTGCCCCAACCGGCAAACAGCTTGACGGTGACGGCGGATCGGGCAGGGTATCTGACCCG GATCGCCAGCGAGGAGATCGGTCTTGCGGCTATGGAGCTGGGGGCAGGCAGGCGGAAGGCGGAGGATGTGCTGGATCCCA CCGCCGGGCTGAAGCTGCACTGTGCAGTGGGGGATCCGGTGACGCCGGGTATGCCCCTTGCCACGCTGTATGCCACGGGC GTGACGGATTTTTCCGCCGCTGCCGTCCGGGTGCGTGGGGCAATGCCCATCGGGGAGGCGCAGCCCCGGGTGCAGCCCTT GCTGCGGCAGGTGATCGATACGGAGGGGACAGCCGGATAG Protein sequence : MRAYDLIMKTRRGEPLTGAEIRFLVSGCVSGDIPDYQLSAWLMAVCFQSLTPAETLELTLAMRDSGDRMDLSGIHGTTAD KHSTGGVGDKTTLILAPVVAACGGYVPKMSGRGLGHTGGTIDKLESIPGFSTAIPYDRFIDTVNRAGCAVVAQSGHLVPA DKKLYALRDLTATVDSIPLICASIMSKKLAMGADCILLDVKTGSGAFMKTEQEAVQLGEAMVRTAKLAGKRCRAVVTDMD MPLGSAVGNAIEVAEAISVLQGQRHTALGKLSLTLAAHMLTMCGRGTLEQCLAAAEQAVDSGTALERFAWMLQCQGGDPA VAEHPERLPQPANSLTVTADRAGYLTRIASEEIGLAAMELGAGRRKAEDVLDPTAGLKLHCAVGDPVTPGMPLATLYATG VTDFSAAAVRVRGAMPIGEAQPRVQPLLRQVIDTEGTAG |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| deoA | YP_005163381.1 | Thymidine phosphorylase | Not tested | Not named | Protein | 4e-68 | 43 |
