Gene Information

Name : RUM_23000 (RUM_23000)
Accession : YP_007830301.1
Strain : Ruminococcus champanellensis 18P13
Genome accession: NC_021039
Putative virulence/resistance : Virulence
Product : Glycosyltransferases involved in cell wall biogenesis
Function : -
COG functional category : -
COG ID : -
EC number : 3.1.26.3
Position : 2442457 - 2443410 bp
Length : 954 bp
Strand : -
Note : -

DNA sequence : 
ATGAGTAGTATTATTTACATCGTTGTTCCATGCTATAACGAGGAGGCTGTGCTGCACGAAACCTCCAGCCGTCTGGCGGA
GAAGATGCACAGTCTGATGCAGGCGGGGAAGATCTCCCCCTTGAGCCGGGTCATGTTCGTCAATGACGGCTCCAAGGATC
GTACCTGGGAGATCATTGAGGAGCTGGTGGCAGGGGATACCCTGTTCCAGGGGGTGAAGCTGTCCCGGAACAAGGGGCAT
CAGAATGCGCTGCTGGCAGGGCTGATGACTGCCAAGGATCACTGCGACGCAGCCATTTCCATGGACGCTGACCTGCAGGA
TGACATCAACGCCGTGGATGAGATGATCGAAAAGTTTGACGGAGGCTGCGATATTGTGTACGGGGTGCGCAGCGAGCGGA
AAACCGATACCTTCTTCAAGAAATTTACCGCCCAGGGCTATTACAAGCTCCTTGCCATGATGGGGGTGGACATCGTCTAC
AACCATGCGGATTACCGGCTCATGAGCCGCCGGGCATTGCAGAATCTGGAATCCTTCGGGGAAGTGAACCTGTTCCTGCG
GGGGGTTGTACCCATGATCGGCTACAAGACGGATAAGGTGTACTACGAGCGTGCGGAGCGGTTCGCCGGGGAGTCCAAGT
ACCCCTTGAAGAAGATGCTTGCCTTCGCCATGGAGGGCATCACCTCCCTGTCCGTCAAGCCCATCCGCTTCATTACTTCC
ACCGGCTTTGTGATCTTTGTTATCAGTCTGCTGATGCTGATCTACAGTCTGGTGCGGTACTTTATGGGCGCTACCATTCC
GGGCTGGACTTCCCTTGCGGTATCCGTCTGGGCGATCGGCGGCTTGCAGCTCCTTGCCATCGGCGTGGTAGGGGAGTACA
TCGGCAAGATCTATCTGGAAACCAAGCACCGACCCAAATACATCGTGGAAACCTATCTCCACCGGGATGAATGA

Protein sequence : 
MSSIIYIVVPCYNEEAVLHETSSRLAEKMHSLMQAGKISPLSRVMFVNDGSKDRTWEIIEELVAGDTLFQGVKLSRNKGH
QNALLAGLMTAKDHCDAAISMDADLQDDINAVDEMIEKFDGGCDIVYGVRSERKTDTFFKKFTAQGYYKLLAMMGVDIVY
NHADYRLMSRRALQNLESFGEVNLFLRGVVPMIGYKTDKVYYERAERFAGESKYPLKKMLAFAMEGITSLSVKPIRFITS
TGFVIFVISLLMLIYSLVRYFMGATIPGWTSLAVSVWAIGGLQLLAIGVVGEYIGKIYLETKHRPKYIVETYLHRDE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
gtrBI AAF09026.1 GtrBI Not tested SHI-O Protein 7e-38 44
ESA_03027 YP_001439092.1 hypothetical protein Not tested Not named Protein 1e-38 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
RUM_23000 YP_007830301.1 Glycosyltransferases involved in cell wall biogenesis VFG0670 Protein 5e-38 44