Gene Information

Name : RUM_21520 (RUM_21520)
Accession : YP_007830176.1
Strain : Ruminococcus champanellensis 18P13
Genome accession: NC_021039
Putative virulence/resistance : Unknown
Product : PTS system, glucose subfamily, IIA component
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2274084 - 2276207 bp
Length : 2124 bp
Strand : +
Note : -

DNA sequence :
ATGAAAGATAAAATATTCGGCGTATTACAGCGGGTGGGGCGATCCTTTATGCTGCCCATAGCCCTGCTGCCCATTGCAGG
TCTGCTGCTTGGAATCGGCAGTTCCTTTACCAATCCCACCACCATCGAAACTTATCACTTGCAGAACGTCATCACCGAAG
GCGGCGTTCTGTATACGCTGCTGGATATTATGAGCAAAACCGGCAGTGCGGTGTTTGACAACCTGGCGCTGCTGTTTGCG
ATGGGGGTCGCCATCGGCATGGCGAAGAAGGAAAAAGAGGTTGCCGCATTGTCCGGCGCCATCGGCTTTCTGGTAATGAA
CACCGCCATCAGCGCTCTAATCCATGCAAAAGGGGGCGTGGAGGCGATGGCTGCCAATTCCACCGCCTCTGTGCTGGGCA
TCACCACCCTGCAAACCGGCGTATTCGGCGGCATTCTGGTAGGACTGGGGGTCGCCGCACTCCACAACCGGTTTTATAAG
ATCCGCCTGCCGCAGGTGCTGTCTTTTTTCGGAGGCACCCGGTTCGTGCCAATCGTTTCCGCCGTTACCTACCTGGCAGT
GGGCGTGCTCCTGTTCTTTGTATGGCCGGTGGTACAGACGGGCATCGCAAAGCTTGGGAATCTGGTGCTCAGCTCTGGCT
ACGCAGGCACCTGGATCTACGGCACCATCGAACGTGCCCTGATCCCCTTTGGTCTGCACCATGTATTCTATATGCCCTTC
TGGCAGACGGAGCTGGGCGGCTCCATGCGCATTGACGGGGTGACTGTCACCGGCGCCCAGAATATCTTTTTTGCGGAGCT
TGCCTCCAAATCCACACAGGTGTTCTCTGTATCCGCCACCCGGTTCATGGCAGGTAAATTCCCCTTTATGATCTTCGGAC
TGCCGGCGGCTGCATACGCCATGTACCGGACAGCCCGGCCGGAAAAGAAGAAGCTGGTGGGAAGTCTGCTGCTGTCGGCG
GCGCTGACCTCCATGCTCACGGGCATTACCGAGCCGTTGGAATTCACCTTTCTGTTCGTGGCACCGGCGATGTATGCGGT
ACACTGTGTGCTGGCTGGCCTGTCCTATATGCTGATGCACATTCTGAACGTGGGTGTGGGCATGACCTTCTCCGGCGGTA
TCATTGACCTGACCCTGTTCGGCATCCTGCAGGGCAACCAGAAAACCCACTGGCTGTGGATTCCGGCGGTGGGGCTGGTG
TACGCTGTGGTATACTATTTCGTGTTCTATTGGATGATCACCAAGCTGGATCTCCGGACGCCGGGCAGAGAGCCGGATGA
TGCGGCACCCAAGCTGTACACCCGGAATGATCTGAACCGGGAAAAAGCATCCCGGGCGGCAGGCAGCAAAAGCCAGGATA
CTATTAGCGCATTGATCCTCACCGGGCTGGGCGGTCTGGAGAATCTGTCGGATCTGGACTGCTGCGCCACCCGGCTTCGG
GTCACGGTGCAGGATCCGGACAAGGTGTCGGACAGCATGCTGAAAGCCAGCGGCGCATCCGGCGTACTCCGCAAGGGCAA
CGGGGTACAGGTGATCTACGGCCCACAGGTATCCGTCATCAAATCTGCTCTGGATGAGTTTCTGGAATCCCCCCAAGCGG
CACATGCCGCAGAGCTTGCAAACCAGGACGCAAGCCCGGAGCCGAACACGCCGGAGCCATCCCAAGCCGGACAGAGCCAA
CTGCTGCATGCCCACATGAACGGCAAGGTGGTGCCTTTGGAGCAGGTGCCGGATGAAGCCTTTTCCGGGAAGGTGCTGGG
GGACGGCTGTGCCATTGAACCGGCGGACGGCAAGCTGTACGCCCCCTGCGATGGGGTCATCGATACGGTATTCGACACCT
GCCACGCTGTGAATATGCGCTCGGATCAGGGTGCGGAGCTGCTGCTGCATGTGGGCATCGACACGGTGAAGCTGGGGGGC
AAATACTTCACCGCCCATGTGCAGGATGGACAGCAGGTCAAAACCGGAGATCTGCTCTTGAGCTTTGATGCGGACAAGAT
CCGGCAGGCAGGCTACCAGCTGACCACGCCCCTGATCGTCTGCAACAGCGAGGACTACAGCAAAATGGAGCCGCTCGCCG
CCGGCGTCATCCGGGCAGGCGCAGCCTTTCTCCGGCTCTCATAA

Protein sequence :
MKDKIFGVLQRVGRSFMLPIALLPIAGLLLGIGSSFTNPTTIETYHLQNVITEGGVLYTLLDIMSKTGSAVFDNLALLFA
MGVAIGMAKKEKEVAALSGAIGFLVMNTAISALIHAKGGVEAMAANSTASVLGITTLQTGVFGGILVGLGVAALHNRFYK
IRLPQVLSFFGGTRFVPIVSAVTYLAVGVLLFFVWPVVQTGIAKLGNLVLSSGYAGTWIYGTIERALIPFGLHHVFYMPF
WQTELGGSMRIDGVTVTGAQNIFFAELASKSTQVFSVSATRFMAGKFPFMIFGLPAAAYAMYRTARPEKKKLVGSLLLSA
ALTSMLTGITEPLEFTFLFVAPAMYAVHCVLAGLSYMLMHILNVGVGMTFSGGIIDLTLFGILQGNQKTHWLWIPAVGLV
YAVVYYFVFYWMITKLDLRTPGREPDDAAPKLYTRNDLNREKASRAAGSKSQDTISALILTGLGGLENLSDLDCCATRLR
VTVQDPDKVSDSMLKASGASGVLRKGNGVQVIYGPQVSVIKSALDEFLESPQAAHAAELANQDASPEPNTPEPSQAGQSQ
LLHAHMNGKVVPLEQVPDEAFSGKVLGDGCAIEPADGKLYAPCDGVIDTVFDTCHAVNMRSDQGAELLLHVGIDTVKLGG
KYFTAHVQDGQQVKTGDLLLSFDADKIRQAGYQLTTPLIVCNSEDYSKMEPLAAGVIRAGAAFLRLS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ef0067 AAM75272.1 EF0067 Not tested Not named Protein 3e-67 42