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Name : RUM_20000 (RUM_20000) Accession : YP_007830040.1 Strain : Ruminococcus champanellensis 18P13 Genome accession: NC_021039 Putative virulence/resistance : Virulence Product : Domain of unknown function DUF87. Function : - COG functional category : - COG ID : - EC number : - Position : 2108258 - 2110699 bp Length : 2442 bp Strand : + Note : - DNA sequence : ATGGGCTTTAGAAAGAGAAATGCCAATAAAAGTGATAACTGCAGCAAGTCTAAGGTTGTCATGGGCAAGCCAGCCTCTCA GCTTACAAAAGAGGACAAAAAAATACTTTCCGCACGAATGGCGGAAATCAAGAGTGCTAATGGCGGTAAGACTACGGTGC AGAGCACCATTCCCTATATGTGTATGTATAAGGACGGTGTTTGCCAGGTATCGGAGAACTTCTTCTCTATGACGGTACAG TTTTATGATGCCAATTACTCTATTTCGGAGTTTGAGGAACAGAATAATATCTTCTCAAAGTATTGTGATGTTATCAATCT CTTTGACAATACGATCAAATTCCAGCTTACCTTTGAAAATCAAAACAGATCAAAGGAAAAGCTCTTAAAAACGGTGCAGA TACCTGAACAGAAAGATGATTTCAATGCAATCCGCAAGGAGTACAGCGAAATGCTTACCGATAAGCTGATGAAAGGCTCT AACGGTCAGTCGGCAAGAAAGTTCCTGACGTTTGGTATCGAATCCGCATCATACAAGGCAGCAAGGGCAAAACTCTTGTC GATCAAAAATGACGTGATCAAGGGCTTTAAGGCTTTTGGCGTGGAAGCGAAACTTCTTGACGGCAGACAACGCCTTGAAG CTCTCTACTATGCCTTGAACCCTTACAGAAATTCTCCATTCATCTTTGATTGGGACAGTATGCTTCATGCAGGAATGGAC ACAAAGGATTCTATCAGTCCGTCCTCGCTGAAATTCAATAAGGCTGACTTTGAGATCGGTAATGCTTACGGTGCTGTATG GGGCATGAATATCCTTGCAGGAGAATTGTCAGACGAAATATTAAAAGACTTTCTTGAAATGCAGAACCTTTTCTGCGTGA ATATCCATGTTGATCCGCTGGATCAGATAGCTGCCCTGAAATTCGTTAAAAAGAAGCTCACCAATGTGGAGCAGATGAAG ATCGACGAACAGAAAAAGGCATCGCAGTCCGGCTATGATCCCGATATTCTTCCGCCTGCGATCAAGATGTATATCGAGGA CATTGAAAAGCTCCTCGCTGACCTCAACAGCAAGAATGAGCGTCTTTTTCATATCAGTATTTCATTGAGAGCTTATGCAA AAAGCAAAAAAGAACTGAAACTTCTTTCTGAGATGCTAAAGCGTGTTTGCCAGAAGAATAACTGCACGATGTTTCCATAT GATTATCGACAGGAACAGACTCTCGTTTCTACACTTCCGCTGTGCTATAACAAAATTCCCGTCCGCCGTGAGATGCACAC AAGCGGTATCGCTATCTTCGTGCCGTTTACCACAAAAGAGCTATTTCAGGACGGACAGGCTACCTATTACGGTATCAATA CGCTGTCAGGAAATATGATCCGTGCCAACAGGTCAAGGCTCAAAAATCCGAATGGACTTATCCTCGGTACGCCGGGTGCC GGCAAGAGTTTCAGTGTTAAGCGTGAAATACTCGACTGCTTTCTGACAACAGTCGATGACATCATCATCTGCGACCCCGA AGGCGAGTATTATCCGCTTGTTTCGGCTCTGCACGGACAGCTTATCCGTATTGCTTCAAACAGCGAACAACACCTGAATC CTATGGATATTACGATTGATGATTTTCTTTTCAGCAATCCTATGGAAGTGATCGCCAATAAGTCCGACTTCCTGATCTCG CTTTGCGAGATCGTTGTCGGAGGTCGCTACGGTCTTTCCGCTGAGGAACGCTCTGTTATCGACAAATGTGTTCAGAGCAT CTACAAGCATTTTATCGAGAATGAGCCGACACCTGAAAAGATGCCGCTTCTCTCCGATTTGCAGCAGGAGCTTAATAAGG AGGGCGAAGTCGCTCTTCGTGTAGCAAATTCTCTTGAAATGTTCGTAAACGGCAGCCAGAACCTCTTTAATCACCGCACC AACATTGATATGAGTAATCGTATCATCTGCTTTGATATTAAGGAACTTGGCAATCAGCTCAAAAAAGTTGGTATGCTGAT CGTGCAGGATACCGTGTGGAACAGAGTTTCCGCAAACCGTGAGAAAAAGAAGATCACTCGCTACTACATTGACGAGTTCC ATCTCCTTCTGAAAGAGGAACAGACAGCGAAATATTCCGCTGAGATCTGGAAGCGTTTCCGTAAATGGGGTGGCGTACCG ACAGGCATCACGCAAAATGTCAAGGACTTGCTTTCTTCTCAGGAGGTCGAAAACATCTTTGACAACTCGGATTTTGTCTA TATGCTGAATCAGGCAGCCGGAGACAGGGACATTCTCGCTGAAAAGCTACATATTTCAAAGGAGCAGATGAAGTTTGTAA CAAACAGCGGTCCGGGTGAGGGGCTTATCCGCTATGATAAAGTGCTTCTGCCGTTTACAGACCATTTTCCGATGGATACA GAGATGTATAAACTCATGACCACAAAACCAACCGGAGAATAA Protein sequence : MGFRKRNANKSDNCSKSKVVMGKPASQLTKEDKKILSARMAEIKSANGGKTTVQSTIPYMCMYKDGVCQVSENFFSMTVQ FYDANYSISEFEEQNNIFSKYCDVINLFDNTIKFQLTFENQNRSKEKLLKTVQIPEQKDDFNAIRKEYSEMLTDKLMKGS NGQSARKFLTFGIESASYKAARAKLLSIKNDVIKGFKAFGVEAKLLDGRQRLEALYYALNPYRNSPFIFDWDSMLHAGMD TKDSISPSSLKFNKADFEIGNAYGAVWGMNILAGELSDEILKDFLEMQNLFCVNIHVDPLDQIAALKFVKKKLTNVEQMK IDEQKKASQSGYDPDILPPAIKMYIEDIEKLLADLNSKNERLFHISISLRAYAKSKKELKLLSEMLKRVCQKNNCTMFPY DYRQEQTLVSTLPLCYNKIPVRREMHTSGIAIFVPFTTKELFQDGQATYYGINTLSGNMIRANRSRLKNPNGLILGTPGA GKSFSVKREILDCFLTTVDDIIICDPEGEYYPLVSALHGQLIRIASNSEQHLNPMDITIDDFLFSNPMEVIANKSDFLIS LCEIVVGGRYGLSAEERSVIDKCVQSIYKHFIENEPTPEKMPLLSDLQQELNKEGEVALRVANSLEMFVNGSQNLFNHRT NIDMSNRIICFDIKELGNQLKKVGMLIVQDTVWNRVSANREKKKITRYYIDEFHLLLKEEQTAKYSAEIWKRFRKWGGVP TGITQNVKDLLSSQEVENIFDNSDFVYMLNQAAGDRDILAEKLHISKEQMKFVTNSGPGEGLIRYDKVLLPFTDHFPMDT EMYKLMTTKPTGE |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| EF2320 | NP_815976.1 | traE protein | Not tested | Not named | Protein | 0.0 | 51 |
| EFAU085_00716 | YP_008394240.1 | Type IV secretory pathway, VirB4 component | Virulence | Not named | Protein | 0.0 | 50 |
