Gene Information

Name : RUM_17070 (RUM_17070)
Accession : YP_007829787.1
Strain : Ruminococcus champanellensis 18P13
Genome accession: NC_021039
Putative virulence/resistance : Unknown
Product : single stranded DNA-binding protein (ssb)
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1852714 - 1853178 bp
Length : 465 bp
Strand : +
Note : -

DNA sequence : 
ATGATTAACAAGGTCATTATCATGGGTCGGCTTACGGCTGACCCGGAATTGAGAAACACGCAGAGCGGCATTGCCGTTAT
ACGGTTTACTGTTGCTGTAAATAGGCAGTATAAGAAAGACCAGGAGCAGCAAGCAGATTTTATCCGTTGCACTGCATGGA
GGCAGTCGGCAGAGTTCATAAGCAAGTATTTCACAAAAGGCAAGATGATCATTGTGGAGGGTGCCTTGCGCAACAATGAT
TACACGGATGTAAATGGTGTTAAACACTATTCCATGGACGTTCAGGTGGACAACGTTTCCTTTGGAGAATCCAAGGGTGG
TGGACAGTCGCAAAATAACACTCAGCCGTCTGTGTCACCCGTCATTACCCCGGAAGTAATACAGAGCGCTACACCTGCAA
GCGAAGCAATCCCGGACTTGAGCGGATTTGAAGAAATCCTCAGTGACGGCGATGTGCCATTTTAA

Protein sequence : 
MINKVIIMGRLTADPELRNTQSGIAVIRFTVAVNRQYKKDQEQQADFIRCTAWRQSAEFISKYFTKGKMIIVEGALRNND
YTDVNGVKHYSMDVQVDNVSFGESKGGGQSQNNTQPSVSPVITPEVIQSATPASEAIPDLSGFEEILSDGDVPF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SAKOR_01963 YP_008492151.1 Single-strand DNA binding protein Not tested ¥ÕSa3 Protein 1e-19 43
SAV1983 NP_372507.1 single-strand DNA-binding protein Not tested ¥ÕSa3 Protein 2e-19 42
SA1792 NP_375091.1 single-strand DNA-binding protein Not tested ¥ÕSa3 Protein 2e-19 42
MW1921 NP_646738.1 single-strand DNA-binding protein Not tested ¥ÕSa3 Protein 5e-19 42
EFAU085_00699 YP_008394223.1 single-strand binding protein Not tested Not named Protein 8e-22 41
SAUSA300_1958 YP_494609.1 single-strand binding protein Not tested ¥ÕSa3 Protein 2e-19 41
SAUSA300_1958 YP_494609.1 single-strand binding protein Not tested ¥ÕSa3 Protein 2e-19 41