Gene Information

Name : RUM_16410 (RUM_16410)
Accession : YP_007829733.1
Strain : Ruminococcus champanellensis 18P13
Genome accession: NC_021039
Putative virulence/resistance : Resistance
Product : ABC-type antimicrobial peptide transport system, ATPase component
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1780995 - 1781609 bp
Length : 615 bp
Strand : +
Note : -

DNA sequence : 
ATGATTCAGATAAACCATGTGAAAAAAGCCATTGGCGGTCATGTGATCTTTGATGACCTGTCCATGCAGATTGCAGACCG
GGAATTTGCGGTACTCACCGGGCCTTCCGGCTGCGGCAAAACCACCCTGCTGCACATGATCGGCGGGATCGAGCCGGTGG
ACAGCGGCGACATTCTCGTGGGAGACTTCAATGTGGCAAATGGAAAAAATCTCATGCACTATTACCGGCATGAAGTGGGC
TTCCTGTTTCAGAATTTTGCCCTGGTAGAGCGGAAAACCGTTGCGGAAAATCTGGGCATGATTCGCAAGGACGCCCGCAG
CAGTCTTTCTATGGTGGATGCCCTCCGGCGTGTAGGCATGGAGGGCAAGGAAACACAAATGGTATATTCTTTGTCCGGCG
GGGAGCAGCAGCGCATTGCCCTTGCCCGGCTTATGATGAAGCAATGCAGTCTGATTCTGGCGGATGAGCCAACCGGTTCC
CTGGATCCGAACAATGCAGCGCAGGTGATGGAAATTCTCAAGTCTTTCTCTGAAATGGGCAAAACTGTCATTATGGTGAC
ACATGCGCCCAATCTCATCGAACCCTCCATGCGGCATATTGCGCTGGATGCATAA

Protein sequence : 
MIQINHVKKAIGGHVIFDDLSMQIADREFAVLTGPSGCGKTTLLHMIGGIEPVDSGDILVGDFNVANGKNLMHYYRHEVG
FLFQNFALVERKTVAENLGMIRKDARSSLSMVDALRRVGMEGKETQMVYSLSGGEQQRIALARLMMKQCSLILADEPTGS
LDPNNAAQVMEILKSFSEMGKTVIMVTHAPNLIEPSMRHIALDA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Spaf_1862 YP_006310627.1 amino acid ABC transporter ATP-binding protein Not tested FWisland_2 Protein 4e-29 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
RUM_16410 YP_007829733.1 ABC-type antimicrobial peptide transport system, ATPase component NC_012469.1.7686946. Protein 2e-28 41