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Name : RUM_12470 (RUM_12470) Accession : YP_007829387.1 Strain : Ruminococcus champanellensis 18P13 Genome accession: NC_021039 Putative virulence/resistance : Unknown Product : Site-specific recombinase XerD Function : - COG functional category : - COG ID : - EC number : - Position : 1376628 - 1377821 bp Length : 1194 bp Strand : + Note : - DNA sequence : ATGGTAGCAGGACATCTGCGAGAGAAAAACGGGTACTATCATATCGTGCTCAACTATGTGGATGAATACGGTAAACGGCA CACGCCGTCAAAATCCACGGGGCTCCCTGTCAAGGGAAATAAGAAGCGTGCCGAAAAAATGCTTATAGAAGCCCGTTCAG CCAAAGAAGCAGAGTTGGAGGCAAGAGCGTTAGAACGCAGTACAGGCAAGGTTTCCACCGATTCCATTCTCTTTACAACA TTTCTGCTCGACTGGTTGGAAATGATAAAAAAGAATGTGGAGGAAACGACCTACGGTGCGTATTCTATGGGAATCAAGAG CAAAATTATCCCATACTTTGAGGAACACCACCCCGGTCTGCTCTTACGGGAGATAAAGCCAAAGCACATTCAGGACTATT ACACCTATGAACTGACGGTGCGGGGCGTTTCCGCAAACACGGTCATACACCGCCACGCAAATATCCGAAAGGCGTTGCAG CACGCTTTCAAACTCGGTTTGATTGACACGAATCCGGCTGATCGCATTGAACGGCCGAAAAAAGAAAAGTTTGTCGGCAG CGCGTATGAGGAAGATGAGCTAAACCGTCTTTTTGAGGTGGTAAAGGGCGACCCCATAGAGCTTGGCGTGATTCTCGGCG CGTTTTACGGACTGCGCCGCAGCGAGGCCGTAGGCTTGAAATGGGATGCGATTGACTTCAAGAAGAAAACGATCACCATA CGGCACACAGTAACGCAGGCGACTATCGACGGCAAGAGCAAAATTATCCAAAAGGATCGTACAAAGACAAAGGCCAGCTA TCGCAGCCTGCCACTTGTACCGCCATTTGAGGAACTGTTGTACCGCCTGAAAGCGGAGCAGGAGCTAAACCGAAAGCTGT GCGGCAGGTCGTATTGTCGGCAATACACCGATTATATCTATGTCAACGAGATCGGAGAGCTTGTAAAACCCGGCTATATC ACCCAGCATTTCCCGCTGGTGCTTGAAAAGAATGGTATGCGGAAAATTCGCTTTCACGATCTCCGGCATAGCTGCGCAAG TCTGTTGTATGCAAACGGTGTCAGCCTGAAAGAGATTCAAGAATGGTTAGGACACAGCGACATTTCGACCACATCAAACA TTTATACGCACCTGAATTTCAGTTCAAAGGTTGCGTCTGCCAATGCGATTTTGGGTGTATATCCCTCCAAATAA Protein sequence : MVAGHLREKNGYYHIVLNYVDEYGKRHTPSKSTGLPVKGNKKRAEKMLIEARSAKEAELEARALERSTGKVSTDSILFTT FLLDWLEMIKKNVEETTYGAYSMGIKSKIIPYFEEHHPGLLLREIKPKHIQDYYTYELTVRGVSANTVIHRHANIRKALQ HAFKLGLIDTNPADRIERPKKEKFVGSAYEEDELNRLFEVVKGDPIELGVILGAFYGLRRSEAVGLKWDAIDFKKKTITI RHTVTQATIDGKSKIIQKDRTKTKASYRSLPLVPPFEELLYRLKAEQELNRKLCGRSYCRQYTDYIYVNEIGELVKPGYI TQHFPLVLEKNGMRKIRFHDLRHSCASLLYANGVSLKEIQEWLGHSDISTTSNIYTHLNFSSKVASANAILGVYPSK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| EF0479 | NP_814262.1 | phage integrase family site specific recombinase | Not tested | Not named | Protein | 4e-59 | 44 |
| ef0001 | AAM75207.1 | putative integrase | Not tested | Not named | Protein | 3e-59 | 44 |
