Gene Information

Name : RUM_11660 (RUM_11660)
Accession : YP_007829318.1
Strain : Ruminococcus champanellensis 18P13
Genome accession: NC_021039
Putative virulence/resistance : Resistance
Product : ABC-type antimicrobial peptide transport system, ATPase component
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1276042 - 1276740 bp
Length : 699 bp
Strand : +
Note : -

DNA sequence :

ATGTTCCTTGAAATCCGTGGAATCAAAAAGCATTTTGGCGAGGGCGAAAGCCGGGTGGAGGTACTCAAAGGCATCGACCT
GGAAATTGCGAAGGGGGAGATTTGTGTTCTGCTGGGACCATCCGGCAGCGGCAAGTCCACCCTGTTGAATATCATCGGCG
GCATTGACAATGCGGACAGCGGCTATATTTCCATCAATGGGGAAAAGACCGCAGAGATGAACGAAAAAGCGCTGACCCTG
TACCGCCGGAAGCATCTGGGGTACATTTTTCAGATGTACAACCTGATTCCCAATCTGAATATCAAAGAAAATGTGGAGGT
AGGGGCATACCTCAGCGACAATCCACTGGATGTGGATGAGTTGCTCAAGACTTTGGGACTGTATGAGCATCGGCACAAGC
TGCCCAATCAGTTGTCCGGCGGGCAGCAGCAGCGTACCGCCATCGGCAGAGCCATTGTAAAGAATCCGGATATTCTGCTG
TGTGATGAGCCGACCGGTGCATTGGATTACAGCACCTCCAAGGAGATTCTGAAGCTGATCGAAGAGGTGAACCGGAAATT
CGGCAATACGGTGATCATGGTGACGCACAATGACGCCATTAAGCTGATGGCGGATCGGGTGGTCAAGCTGCGGGATGGCA
TGATCCGGAAGAATTACCTGAACGAGCACCGGACAAGTGCGGCAGAGCTAGAATGGTAA

Protein sequence :

MFLEIRGIKKHFGEGESRVEVLKGIDLEIAKGEICVLLGPSGSGKSTLLNIIGGIDNADSGYISINGEKTAEMNEKALTL
YRRKHLGYIFQMYNLIPNLNIKENVEVGAYLSDNPLDVDELLKTLGLYEHRHKLPNQLSGGQQQRTAIGRAIVKNPDILL
CDEPTGALDYSTSKEILKLIEEVNRKFGNTVIMVTHNDAIKLMADRVVKLRDGMIRKNYLNEHRTSAAELEW

• Homologs from PAI DB

Gene	GenBank Accn	Product	Virulance or Resistance	PAI or REI	Alignment Type	E-val	Identity
CpC231_1466	YP_005683828.1	ABC transporter ATP-binding protein	Not tested	PiCp 5	Protein	6e-38	44
cpfrc_01473	YP_003783873.1	hypothetical protein	Not tested	PiCp 5	Protein	6e-38	44
CpI19_1473	YP_005685914.1	ABC transporter ATP-binding protein	Not tested	PiCp 5	Protein	6e-38	44
Cp1002_1464	YP_005681730.1	ABC transporter ATP-binding protein	Not tested	PiCp 5	Protein	2e-35	44

• Homologs from CARD and BacMet (resistance genes)

Gene	GenBank Accn	Product	ID of source DB	Alignment Type	E-val	Identity
RUM_11660	YP_007829318.1	ABC-type antimicrobial peptide transport system, ATPase component	CP001581.1.gene798.p	Protein	4e-46	46
RUM_11660	YP_007829318.1	ABC-type antimicrobial peptide transport system, ATPase component	NC_012469.1.7685735.	Protein	7e-49	44
RUM_11660	YP_007829318.1	ABC-type antimicrobial peptide transport system, ATPase component	CP001581.1.gene598.p	Protein	1e-41	41
RUM_11660	YP_007829318.1	ABC-type antimicrobial peptide transport system, ATPase component	NC_012469.1.7686878.	Protein	4e-36	41