Gene Information

Name : SY1_13610 (SY1_13610)
Accession : YP_007827698.1
Strain : Synergistetes bacterium SGP1
Genome accession: NC_021038
Putative virulence/resistance : Virulence
Product : Sugar transferases involved in lipopolysaccharide synthesis
Function : -
COG functional category : -
COG ID : -
EC number : 2.7.8.6
Position : 1491216 - 1491812 bp
Length : 597 bp
Strand : -
Note : -

DNA sequence : 
ATGCTCAAACGCCTTCTGGACGTCGCCGGGGCCGCACTGGGGCTCGTCCTCCTCTCCCCCGTCATGCTGGCCGTCGCGGT
CTGCGTGCGGCGGCGCATGGGGTCCCCCGCCGTCTTCGTGCAGACGCGAGCCGGGCGCGGAGGCAGGCCCTTCGCCCTCT
ACAAGTTCCGCTCCATGACGGACGAGCGCGGCCCCGACGGGAACCTCCTGCCGGACGCGGAGCGCCTGACACCCTTTGGG
CGGTTTCTGCGCCGCACGAGCCTGGACGAGCTGCCTCAGCTCTGGAACGTCCTGCGGGGCGACATGAGCCTCGTCGGGCC
CCGCCCGCTCCTGACGCAGTACGTGCCGCTCTACGACGCCCGGCAACGAAAGCGCCTCGACGTCAGGCCGGGCATCACGG
GCTGGGCGCAGGTCAACGGGCGCAACGCGCTCTCGTGGCCCGCGAAGTTCGAGTTGGACGTCTGGTACGTGGAGCACCGC
TCGACGGGGCTGGACCTGAAGATCATCCTGCTCACCATAAAAAAGGTGCTGGCACGCGAGGGCATCGCCGCGTCGGGCGA
GGCCACCATGCCGCCGTTCGAGGGAAATAGATCATGA

Protein sequence : 
MLKRLLDVAGAALGLVLLSPVMLAVAVCVRRRMGSPAVFVQTRAGRGGRPFALYKFRSMTDERGPDGNLLPDAERLTPFG
RFLRRTSLDELPQLWNVLRGDMSLVGPRPLLTQYVPLYDARQRKRLDVRPGITGWAQVNGRNALSWPAKFELDVWYVEHR
STGLDLKIILLTIKKVLAREGIAASGEATMPPFEGNRS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
cap1N AAL26667.1 type 8 capsule synthesis gene Virulence SCCcap1 Protein 1e-21 43
SSP0070 YP_300160.1 capsular polysaccharide synthesis protein Not tested SCC15305cap Protein 2e-21 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SY1_13610 YP_007827698.1 Sugar transferases involved in lipopolysaccharide synthesis VFG1309 Protein 2e-22 42