Gene Information

Name : SY1_06850 (SY1_06850)
Accession : YP_007827290.1
Strain : Synergistetes bacterium SGP1
Genome accession: NC_021038
Putative virulence/resistance : Virulence
Product : Lysyl-tRNA synthetase (class II)
Function : -
COG functional category : -
COG ID : -
EC number : 6.1.1.6
Position : 769802 - 771337 bp
Length : 1536 bp
Strand : -
Note : -

DNA sequence :
ATGGAGAACGCCGTGAAGGGCCCCGGCCAGGGGGGGCTGGAGCAGGAGGGCGCGGATAACGAGGTCGTCCGGCAGATGAA
GGAGAAGCTCCTTCGCCTGCGCCGGGAGGAGGGCTTTGACCCCTACGTCGCCGAGACGTGGGACTGCCGGGACCACCTGG
CGGACGTCCGCTGTCGTTTCGAGCACCTGGCGCCGGAGGAGTCAGACGAGACGGTGACGCTGAGCACGGCGGGCCGCCTG
ATGACGCTGCGCCGGCAGGGCAGGACGACCTTCGCCGATTTGGCGGACGAGACGGGGCGCATCCAGCTCTACTTTCAGGT
GAACGCTCTTGGGGAGAAGCCCTACGAGTTTCTGAAGAAGTGGGTGGACACGGGGGACTGGCTGGGCGTCGTGGGGCATC
CCTGCCGCACCAAGCGCGGAGAACTGACCATTCAGGTGACGGACTACAAGCTGCTCAGCAAGTCCATCCGCCCGCTGCCG
GAGAAGTGGCACGGCCTGACGGATACGGAGACCCGCTATCGACGGCGCTACATGGACCTCATCGCAAACCCGGAGGTGCG
CGAGGTGTTCCGCAAGCGCTCGAAGATCATCTCCTCCTTCCGAGAGACGCTGGAGGCCCACGGGTCGCTGGAGGTGGAGA
CGCCCATCCTGTCGGTGCTGGCGGGGGGCGCCAACGCCCGGCCGTTCAAGACCTTTCACAACGCCCTGGGTTTGGACATG
TACCTGCGCATCGCGGTGGAGCTCTACCTGAAGCGTCTCGTGGTGGGCATGATGGGCCGCGTGTACGAGATCGGGCGCAA
CTTCCGCAACGAGGGCATCGACACCATGCACAACCCGGAGTTCACGATGATGGAGGTCTACTGGCCCTACGCGAACTACG
AGGACATGATGAACCTCGCGGAGGAGCTGATCCGCAACGCGGCAAAGGCCATCGGTACCCTTGAGATCGAGTGGAACGGC
GTCAAGGCGGACCTGTCGCGGCCCTTCCGCCGCATCACGATGCTGGATGCGGTGAAGGAGTACGCCGGCGTGGACCTGAG
CGCCGTGACGGACGACGAGGCGGCGCGGAAGATCGCCCGCGAGAAGGGCTTGGGCGGCGACCTGAAGGGAACGGAGAGCC
GCTTTGCCGTGCTGAACCTGCTGTATGAGGCCTTTTGCGAGGAAAAAATGGTGCAGCCGACCTTCGTGATGGGGCACCCC
ACGGAGATATCCCCCCTCTCGAAGCGGGACCCGGAGAACCCCGACTACACTCACCGCTTCGAGCTCTTCATGTTCGGCAA
GGAAGTGGCCAACGCCTTCAGCGAGCTGAACGACCCGCTGGACCAGCGGGCGCGCTTCGAGGACCAGATGCGCAAGAAGG
AGGCGGGCGACGATGAGGCCCACGCCTTCGACGAGGACTTCATCAACGCCATTGAGGTGGGGTTGCCGCCCACGGGGGGG
ATGGGCATCGGCATGGACCGTCTCGTCATGTTCCTGACGGGGGCGCGGTCCATTCGCGACGTCATCCTCTTTCCGGCGAT
GAAGCCGAACGAGTGA

Protein sequence :
MENAVKGPGQGGLEQEGADNEVVRQMKEKLLRLRREEGFDPYVAETWDCRDHLADVRCRFEHLAPEESDETVTLSTAGRL
MTLRRQGRTTFADLADETGRIQLYFQVNALGEKPYEFLKKWVDTGDWLGVVGHPCRTKRGELTIQVTDYKLLSKSIRPLP
EKWHGLTDTETRYRRRYMDLIANPEVREVFRKRSKIISSFRETLEAHGSLEVETPILSVLAGGANARPFKTFHNALGLDM
YLRIAVELYLKRLVVGMMGRVYEIGRNFRNEGIDTMHNPEFTMMEVYWPYANYEDMMNLAEELIRNAAKAIGTLEIEWNG
VKADLSRPFRRITMLDAVKEYAGVDLSAVTDDEAARKIAREKGLGGDLKGTESRFAVLNLLYEAFCEEKMVQPTFVMGHP
TEISPLSKRDPENPDYTHRFELFMFGKEVANAFSELNDPLDQRARFEDQMRKKEAGDDEAHAFDEDFINAIEVGLPPTGG
MGIGMDRLVMFLTGARSIRDVILFPAMKPNE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAD66193.1 putative lysil-tRNA synthetase LysU Not tested PAI III 536 Protein 4e-97 43

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SY1_06850 YP_007827290.1 Lysyl-tRNA synthetase (class II) VFG1668 Protein 3e-97 43