Gene Information

Name : SY1_24290 (SY1_24290)
Accession : YP_007828297.1
Strain : Synergistetes bacterium SGP1
Genome accession: NC_021038
Putative virulence/resistance : Virulence
Product : ATPases with chaperone activity, ATP-binding subunit
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2697847 - 2700324 bp
Length : 2478 bp
Strand : -
Note : -

DNA sequence :
ATGTGGCAATTTTTCACGGAACGAGGCAAGAGAGTCATCCAGCTGGCCCACCACGAAGCGCTTCAGATGGGGCATCCCAT
GGTGGAGCCGGAGCACCTCCTGGTGGGGCTGGCGCAGGAGGGCGGCGGCATCGCCTGTCGCGCCCTGATCGAGTTGGACG
TGTCGCCTGAGAGGCTGTGCACCCACATCCGGGAGATCATGGGGCGATCCCAGCCCGCGTCCAGGCCCATTGACCTGCCG
CTCAGTCCGCGCATGAAGAGGGCGCTTGAGCTGTCCATGGTCGAGGCCCGCAAGATGGGCGTCAACTACGTCGATACGGA
GCACATCCTGTTGGGCGTCCTGGCGGACGAGAGCAGCATGGTGGTCCAGCACTTCCTGACGATGGGGATCACCAGGGAGG
CCGTCCTGAAACAGGTGACCACCATCATCGAAGCCAGCGCAGTGAGCGCCGGGGGGGGCCAGGGGCAGAACGTGGAGCTC
CTGACGGACCGGCTGAAGCGGCAGAGCAGGAGCCGCACGCCGACGCTGGATCAGCTGGGAGTGGACTTGACCCGGAAGGC
CCGCGACGGCGAGCTCGACCCCGTCATCGGGCGCGAGCGGGAGATCCGCCGCGTCATCCAGGCGCTGTGCCGACGCACGA
AGAGCAACCCCGTCCTGATCGGCGACCCCGGCGTCGGCAAGACGGCCATCGTCGAGGGGCTGGCCCAAAAGATCGCGTCG
GGCGCCGCGCCGGACCCCCTGAGGGAGAAGCGCATCATCCAGCTCAACACGGCGAACCTCGTGGCGGGCACCAAGTACCG
GGGGGAGTTCGAGGAGCGGCTGCGCCGCATCGTGAAGGAGCTCTCCGACTCCGGCGAGGTCATCCTCTTCGTGGACGAGG
TGCACACCATCGTCGGCGCCGGCAGCGCCGAGGGGGCAATGGACGCGGCCAACATCCTGAAGCCCAGCCTCTCGCGCGGG
AAGTTCCAGATGATCGGCGCGACGACCCAGGCGGAGTACCACAAGTACGTGGAGCGCGACAGCGCCCTGGAGCGCCGCTT
CCAGCCCATCCTGATCGAGGAGCCCGGCATCGAGGACTCCGTCAGCATCCTGCGTGGGCTCCGGGACCGTTACGAGGAAC
ACCACCAGGTCACCTTCACGAACGACGCCCTCCAGGCTGCAGCGAGCCTCTCCTCGCGCTACGTGCAGGACCGCTTCCTG
CCGGACAAGGGCATCGACCTCATCGACGAGGCCGGGGCACGGACCCGGCTTCGGTCGCTGGACCCGCCGGAGTCCGTCCG
GGAGCTGGAGCGCCGCCTCGCGGACACTCAGCGCCAGAAGGAGGAAGCCGTGCTGAATCAGCAGTTCGAGCGCGCGGCGC
AGCTGCGCGACGAGGAGCACGCCCTGGCGGACCAGCTCGAGGCTGCGATGGAGGAGTGGCGCAGCGGACGGAGCGAGGCG
CGCGTCGAGGTCACGGGCGAGGACATCGCCGAGGTGGTGGCGGAGATGACGGGCATCCCGGTGAAGCAGCTCACGGAGAC
GGAGACGGAGCGACTCCTGCGCATGGAGGACGAGATATCCTCCCGCCTGATCGGACAGGACGAGGCGGTCAGCGCCGTGG
CGCGGGCCATCCGCCGCGCGCGCACGGGCCTCCACGACCCGCGGCGGCCCATCGGCAGCTTCCTGTTCATGGGCCCCACC
GGCGTGGGCAAGACGGAGCTGGCCCGTTGCCTGGCCCGATTTCTCTTCGGACGCGAGGACGCCATGATCCGCATCGACAT
GAGCGAGTTCATGGAGAAGCACGAGGTCTCGAAGCTCCTGGGCGCCCCCCCCGGCTACGTGGGGCATGAGAGCGGGGGGA
AGCTGACGGAGGCCGTCCGGCGACGGCCCTACTCCGTCATCCTGTTCGACGAGATCGAGAAGGCCCACGCGGAGGTCTAC
AACGTCCTGCTGCAGATCCTGGACGACGGGCACCTGACCGACGGCCAGGGACGCAGGGTCGACTTCCGCAACACGGTCAT
CATCATGACGAGCAACGTCGGCGCGAAGGAGGCCCAGCAGGGCAGCGCACTGGGCTTCGGCTCCGCGGAGGCGTCGGAAC
AGCGAAACTGGGAGCACCAGAAGGCCGTCATCATGGAAGAAGCTCAGCGCACCTTCCGGCCGGAGTTCCTGAACCGCATC
GACGAGATGGCCGTCTTCCGTCCCCTGTCGCGGGACAGCCTGCTGCGCATCGTCGACGCCATGCTGGCGGAGCTGGACGG
TCGGCTGAAGGGACAGGGACTCTCCCTGGACGTCAGCGTGGGGGCGAAGGAGAAGATCCTGGAGAAGGGCTTCAAGCCGA
AGTACGGCGCCCGCCCCCTGCGCCGAGCCATCCAATCCCTGCTGGAGGACCGACTGGCCGACTCCCTACTGGCGCGGAAG
TTCGCGGACGGCACGCGCATCGACGTCGACGTCGAGGACGGGGAGCTTCGCCTGGCCCCTCACGGCGCGAAGGACTGA

Protein sequence :
MWQFFTERGKRVIQLAHHEALQMGHPMVEPEHLLVGLAQEGGGIACRALIELDVSPERLCTHIREIMGRSQPASRPIDLP
LSPRMKRALELSMVEARKMGVNYVDTEHILLGVLADESSMVVQHFLTMGITREAVLKQVTTIIEASAVSAGGGQGQNVEL
LTDRLKRQSRSRTPTLDQLGVDLTRKARDGELDPVIGREREIRRVIQALCRRTKSNPVLIGDPGVGKTAIVEGLAQKIAS
GAAPDPLREKRIIQLNTANLVAGTKYRGEFEERLRRIVKELSDSGEVILFVDEVHTIVGAGSAEGAMDAANILKPSLSRG
KFQMIGATTQAEYHKYVERDSALERRFQPILIEEPGIEDSVSILRGLRDRYEEHHQVTFTNDALQAAASLSSRYVQDRFL
PDKGIDLIDEAGARTRLRSLDPPESVRELERRLADTQRQKEEAVLNQQFERAAQLRDEEHALADQLEAAMEEWRSGRSEA
RVEVTGEDIAEVVAEMTGIPVKQLTETETERLLRMEDEISSRLIGQDEAVSAVARAIRRARTGLHDPRRPIGSFLFMGPT
GVGKTELARCLARFLFGREDAMIRIDMSEFMEKHEVSKLLGAPPGYVGHESGGKLTEAVRRRPYSVILFDEIEKAHAEVY
NVLLQILDDGHLTDGQGRRVDFRNTVIIMTSNVGAKEAQQGSALGFGSAEASEQRNWEHQKAVIMEEAQRTFRPEFLNRI
DEMAVFRPLSRDSLLRIVDAMLAELDGRLKGQGLSLDVSVGAKEKILEKGFKPKYGARPLRRAIQSLLEDRLADSLLARK
FADGTRIDVDVEDGELRLAPHGAKD

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
clpC YP_005163377.1 ATP-dependent Clp protease ATP-binding subunit Not tested Not named Protein 0.0 49

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SY1_24290 YP_007828297.1 ATPases with chaperone activity, ATP-binding subunit VFG0079 Protein 0.0 52
SY1_24290 YP_007828297.1 ATPases with chaperone activity, ATP-binding subunit VFG0080 Protein 1e-148 52