Gene Information

Name : CK3_03500 (CK3_03500)
Accession : YP_007822692.1
Strain : butyrate-producing bacterium SS3/4
Genome accession: NC_021035
Putative virulence/resistance : Unknown
Product : DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 365245 - 365664 bp
Length : 420 bp
Strand : -
Note : -

DNA sequence :
ATGAAGCCATCTGAATTTCAGACAACCATAGAGAACCAGTTTGATTATATCTGTAAAGTCGCTATGGAGGATGAACGCAA
AGACTATCTCAAAGCGTTGTCCAGACAGTGTAAACGGGAAACCCTGTTCTGTGATATGGACGATTACACCGTCAATCTGT
TTTCTTCCGAAGACACCTATCCCTCCCATTTCCATACTTTTGAAATGGATGGATTTACTGTCCGCATTGAAAACAGCCTA
TTAGCAGAAGCATTAGAAAATCTGGATGGAAAGAAACGTGACGTTATCCTGAGATATTATTTCCTCGGATTTGACGATAC
GGAAATTTCAAAAATTCTGGAAGTCAACCGTTCTACCATCCAGAGAAGAAGACACGCCGGACTGGAATTTATCAAAAAAT
TTATGGAGGAAGAAGCATGA

Protein sequence :
MKPSEFQTTIENQFDYICKVAMEDERKDYLKALSRQCKRETLFCDMDDYTVNLFSSEDTYPSHFHTFEMDGFTVRIENSL
LAEALENLDGKKRDVILRYYFLGFDDTEISKILEVNRSTIQRRRHAGLEFIKKFMEEEA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SSU05_0919 YP_001198285.1 hypothetical protein Not tested 89K Protein 1e-30 57
SSU98_0925 YP_001200483.1 hypothetical protein Not tested 89K Protein 1e-30 57