Gene Information

Name : CK3_30430 (CK3_30430)
Accession : YP_007824985.1
Strain : butyrate-producing bacterium SS3/4
Genome accession: NC_021035
Putative virulence/resistance : Virulence
Product : holin, phage phi LC3 family
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3058508 - 3058774 bp
Length : 267 bp
Strand : +
Note : -

DNA sequence :
ATGATTAACTGGAAAGTGCGTGTAAAAAACAAGAGCTTTTGGATTGCTCTGATTCCGGCGGTGCTTCTGCTGGTACAGGT
GATTGCCGCTGTCTTCGGTTACACCCTCGATTTGGGTGAGCTGGGGGACAAGCTGTTGGCTGTTGTCAATGCTCTGTTCG
CAGTCCTCACGATTCTCGGTATCGTGACTGACCCGACCACTGCTGGCATTGGAGATTCCAAACAGGCTCTTACTTACGAG
ACACCTAAAAAAGAGGACGCAGTTTAA

Protein sequence :
MINWKVRVKNKSFWIALIPAVLLLVQVIAAVFGYTLDLGELGDKLLAVVNALFAVLTILGIVTDPTTAGIGDSKQALTYE
TPKKEDAV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SAV1946 NP_372470.1 holin-like protein Not tested ¥ÕSa3 Protein 5e-07 47
SA1760 NP_375055.1 hypothetical protein Not tested ¥ÕSa3 Protein 5e-07 47
SAUSA300_1924 YP_494575.1 holin Virulence ¥ÕSa3 Protein 5e-07 47
SAUSA300_1924 YP_494575.1 holin Virulence ¥ÕSa3 Protein 5e-07 47
SAKOR_01925 YP_008492113.1 Holin Virulence ¥ÕSa3 Protein 5e-07 47
MW1887 NP_646704.1 hypothetical protein Not tested ¥ÕSa3 Protein 5e-07 47
SAOV_1911 YP_005737356.1 phage-associated holin Not tested ¥ÕSa3 Protein 0.014 43