Gene Information

Name : CK3_13930 (CK3_13930)
Accession : YP_007823582.1
Strain : butyrate-producing bacterium SS3/4
Genome accession: NC_021035
Putative virulence/resistance : Resistance
Product : ABC-type antimicrobial peptide transport system, ATPase component
Function : -
COG functional category : -
COG ID : -
EC number : 3.6.3.-
Position : 1411883 - 1412701 bp
Length : 819 bp
Strand : +
Note : -

DNA sequence :
ATGGAAAAGACTGAATTCTCAATACAAATAGATACCGCAGAGCAGAAAAAAATGTCTGACGAGCCGATGAAACAGGAAGA
GGCAGTTTCAAAAGTTCATGAGAAGTTGGAAAAGCAGGAACCTCTGATAGAGCTGCGCAATATCTACAAGATCTACTACA
TGGGCGACGAGGAAGTCCACGCCAACGACGGCATCAGCCTTTCCATCAACAAAGGCGAGTTCGTCGCCATCGTCGGCAAA
TCTGGAAGCGGAAAATCAACCCTGATGAACATCATCGGCGCCCTGGATGTCCCGACGGAGGGCGAATATTTCCTCGGCGG
CGAGGACGTGGCGGATATGTCCGACAACGAGCTGGCGGAGATCAGAAACCGCATGATCGGCTTTATCTTTCAGCAGTACA
ACCTGCTTCCAAAGTTAAATCTCTTAGAAAACGTGGAACTTCCGCTTCTCTACGCCGGTTATGACAAAAAGGAACGTCGG
GAGCGGGCTATGAATTCCCTGAAAAGGGTCGGACTTGAAGAAAAATGGAAGAATCTTCCGAACCAGCTCTCCGGCGGCCA
GCAGCAGCGAGTCTCCATCGCGCGGGCTCTCGCAGGAGATCCGTCCTTAATCCTGGCGGATGAGCCCACGGGTGCTCTGG
ACTCCAGGACAGGCCGGGAAGTGCTTGATTTTTTAAAGAAACTCAATGAAGAAGGAAACACGATCGTCATGATCACCCAC
GACAGCTCCATCGCTTTGGAGGCGAAGCGGGTGGTGCGGATCCATGACGGAAAGATCAATTTCGACGGGGATGTGAAAAA
GTATGCTGCAATCATTTAA

Protein sequence :
MEKTEFSIQIDTAEQKKMSDEPMKQEEAVSKVHEKLEKQEPLIELRNIYKIYYMGDEEVHANDGISLSINKGEFVAIVGK
SGSGKSTLMNIIGALDVPTEGEYFLGGEDVADMSDNELAEIRNRMIGFIFQQYNLLPKLNLLENVELPLLYAGYDKKERR
ERAMNSLKRVGLEEKWKNLPNQLSGGQQQRVSIARALAGDPSLILADEPTGALDSRTGREVLDFLKKLNEEGNTIVMITH
DSSIALEAKRVVRIHDGKINFDGDVKKYAAII

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 9e-29 44
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 4e-30 44
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 4e-30 44
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 4e-30 44
cur_1502 YP_001800896.1 cell division ATP-binding protein FtsE Not tested Not named Protein 6e-26 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
CK3_13930 YP_007823582.1 ABC-type antimicrobial peptide transport system, ATPase component NC_012469.1.7686878. Protein 1e-50 56
CK3_13930 YP_007823582.1 ABC-type antimicrobial peptide transport system, ATPase component CP001581.1.gene798.p Protein 4e-39 50
CK3_13930 YP_007823582.1 ABC-type antimicrobial peptide transport system, ATPase component CP001581.1.gene598.p Protein 2e-36 50
CK3_13930 YP_007823582.1 ABC-type antimicrobial peptide transport system, ATPase component NC_008702.1.4606598. Protein 9e-37 48
CK3_13930 YP_007823582.1 ABC-type antimicrobial peptide transport system, ATPase component NC_012469.1.7685735. Protein 9e-33 44
CK3_13930 YP_007823582.1 ABC-type antimicrobial peptide transport system, ATPase component NC_012469.1.7686946. Protein 4e-25 41