Gene Information

Name : CK3_12860 (CK3_12860)
Accession : YP_007823494.1
Strain : butyrate-producing bacterium SS3/4
Genome accession: NC_021035
Putative virulence/resistance : Resistance
Product : Predicted transcriptional regulator
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1296250 - 1296522 bp
Length : 273 bp
Strand : +
Note : -

DNA sequence :

ATGCACATCAGCTATAAACCACTCTGGCACACACTGTTAGAGCGTGATATGAGAAAAGAGGATTTAAGGCTTGCCGCTGG
TATGACAACAAATATGATTGCCAACATGAGCAAAGAGGGAAAGCACATCAGCATGGATACATTAGCCCGTATCTGCGAAA
CGCTGAATTGTGAGATTACCGATGTGATTGAGTTAGTACCAGACGAGCCTGCTTCCACAGGAGGTAAGGAACATGAGCGA
ATTGAAACCAAGAATAACGGAAAACGGAATTGA

Protein sequence :

MHISYKPLWHTLLERDMRKEDLRLAAGMTTNMIANMSKEGKHISMDTLARICETLNCEITDVIELVPDEPASTGGKEHER
IETKNNGKRN

• Homologs from PAI DB

Gene	GenBank Accn	Product	Virulance or Resistance	PAI or REI	Alignment Type	E-val	Identity
Cp1002_1456	YP_005681720.1	hypothetical protein	Not tested	PiCp 5	Protein	1e-12	47
cpfrc_01461	YP_003783861.1	hypothetical protein	Not tested	PiCp 5	Protein	3e-13	47
CpC231_1455	YP_005683818.1	hypothetical protein	Not tested	PiCp 5	Protein	3e-13	47
CpI19_1462	YP_005685904.1	hypothetical protein	Not tested	PiCp 5	Protein	3e-13	47
SPN23F_09520	YP_002510935.1	regulatory protein	Not tested	PPI-1	Protein	5e-10	42
SP_1030	NP_345505.1	hypothetical protein	Not tested	PPI-1	Protein	5e-10	42

• Homologs from CARD and BacMet (resistance genes)

Gene	GenBank Accn	Product	ID of source DB	Alignment Type	E-val	Identity
CK3_12860	YP_007823494.1	Predicted transcriptional regulator	DQ212986.1.gene3.p01	Protein	4e-13	42