Gene Information

Name : clpB (KUM_1344)
Accession : YP_007822289.1
Strain : Taylorella asinigenitalis 14/45
Genome accession: NC_021033
Putative virulence/resistance : Virulence
Product : chaperone protein ClpB
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1410137 - 1412707 bp
Length : 2571 bp
Strand : -
Note : -

DNA sequence :
ATGCGTTTTGAAAAATTTACTACTAAGTTTCAGCAATCAATTGCGGATGCTCAGAGTCTAGCTTCTCGTAACGATAATCA
GTATATTGAGGGTCATCATGTGCTCTCCGCGATGTTGGCTGATGAAGGCTCGGGCATTGCCAGCTTGCTTGCTCAGGCGG
GTGTGCGCGTAAACCAGTTGCAAACTAAGTTAAACCTTGCATTGAATAATTTACCAAAGGTAGAAGGTGCGGACGAAATT
CAAATTAGTCGTGCTTTAAATCAACTTCTTTTGAAAACCGATAAAGAGTCATCTAAGAGAGGGGATAATTTTATTGCAAG
TGAGTTGTTCTTGGTGGCATTGGCAGAGGAAAAGGGTGAGCTTGGTACGATCTTAAAAGATTGTGGTTTAGAGAAAAAGG
CTTTGCTGGCTGCTATTGAGGCGATACGGGGGGATAGCACTGTCTCTGATCAAGAAGGAGAATCTCAAAGACAGGCATTG
AAAAAATACACTACTGACCTAACTGAGCGTGCTCGTATGGGCAAGTTAGACCCAGTAATTGGACGTGATGATGAAATTCG
ACGTGCAATTCAAATTTTGCAACGTCGTAGTAAAAATAATCCTGTTCTAATCGGTGAGCCAGGTGTTGGTAAAACAGCAA
TTGTTGAAGGGCTTGCTCAAAGAATCGTGAATGATGAGGTTCCTGAGTCTTTACGTGGTAAACGTGTACTTTCTTTAGAT
ATGGCTTCCTTATTAGCTGGGGCTAAATTTAGGGGTGAATTTGAGGAACGTTTAAAAGCAGTTTTAAAAGAGCTCGCTCA
AGATGAGGGAAATAATATTGTATTTATCGATGAAATACATACTATGGTCGGAGCTGGTGGAGCAGAGGGTGCCATCGATG
CGGGAAATATGCTTAAACCAGCATTGTCACGAGGAGAGTTGCATTGTATAGGGGCGACCACTTTAGATGAATATCGCAAA
TATATAGAAAAAGATGCAGCTTTGGAGCGTCGATTTCAGAAGGTGCTTATTGATGAGCCTGATGTAGAGGCAACCATTGC
CATCTTACGCGGACTTAAGGAGAGATATGAAATTCATCATGGGGTAGAAATTACGGACCCAGCTATAGTTGCGGCGGCAG
AATTAAGTAATCGTTATATAACAGATAGATTTTTGCCAGATAAGGCTATTGACTTGATTGATGAGGCGGCTGCACGCATC
CGTATGGAGATTGATTCTAAGCCAGAAGTGATGGATCGTTTGGACCGACGCATCATTCAACTTAAGATTGAGCGAGAGGC
TGTTCGCCGCGAGGACGACGAAGCTTCTAAACGTCGGTTGCAGTTAATCGAGGATGAACTAGCTAAGCTTCAACGCGAAT
ACGATGACTATGAGCAAATCTGGAAAGCTGAAAAATCTTCTGTTCATGGTGTACAGTCCATTCGTGAGGATATCGATAAG
GTTAAGGCACAGATGGCTGAATACCAGCGTCAGGGCGAATATGAGAAGCTATCGGAGTTGCAGTATGGAAAATTGCCAGA
CCTTGAGCTGCGTTTAAAATCTGCAGAAAAAGGGGAAGTGAAGAATCAGCTTCTTCGGACAGAGGTTGGTACTGAAGAAA
TTGCAGAAGTTGTATCACGTGCGACAGGTATTCCTGTAGCGAAAATGATGCAAGGTGAAAGGGCGAAATTATTGACCATG
GAAGATCGTTTGCACGAGCGTGTAGTTGGTCAGGATGAGGCTGTTCGCTTAGTGTCTGATGCTATTAGGCGTTCTCGTGC
TGGTCTTTCTGATCCAAGTAAACCTTACGGATCATTCCTATTTTTAGGTCCTACTGGTGTAGGTAAGACTGAGCTGACTA
AGGCTTTGGCGAATTTCTTGTTTGATTCCGATGATCACATGGTTCGTATTGATATGAGCGAATTTATGGAGAAGCATACT
GTGGCTCGCTTAATAGGTGCACCTCCAGGGTATATTGGATATGAAGAGGGTGGTTATTTAACTGAAGCCATACGACGTAA
GCCGTATAGTGTAATTTTGCTGGACGAAATCGAAAAAGCTCATCCTGATGTGTTCAATATTTTGCTTCAGGTTTTGGATG
ATGGCCGTTTGACTGATGGGCAGGGTCGCACAGTTGATTTCAGAAATACCGTCATTGTGATGACTTCAAATATAGGTTCT
CAACATATTCAGAAAATGAGTGGAGAGCCATATGAGAAAATTAAGGACGTGGTTTGGGATGAATTGAAAAATTCGTTTAG
ACCTGAGTTTTTAAATCGTATAGATGAAATAGTGGTGTTCCACGGTCTTGAGCAAGATCAAATCGCAAACATTGCCAAAA
TACAAATTAAGCGATTAGCTCAGAGATTGGGGCAGTTTGAAATGAAACTTGAGATTTCGGACGAAGCAATTGCTAAAATT
GCTGAAGCAGGCTTTGATCCAGTGTTTGGGGCTCGTCCGCTAAAACGTGCGATACAGCAGCTAATTGAAAATCCTTTATC
TAAGCGTATTTTGCAGGGCGAATTTACCGCTAAAGATACCGTGAAAGTGGATTTTGATGAGGAATCGGATCAATTCACAT
TTAATGCTTAA

Protein sequence :
MRFEKFTTKFQQSIADAQSLASRNDNQYIEGHHVLSAMLADEGSGIASLLAQAGVRVNQLQTKLNLALNNLPKVEGADEI
QISRALNQLLLKTDKESSKRGDNFIASELFLVALAEEKGELGTILKDCGLEKKALLAAIEAIRGDSTVSDQEGESQRQAL
KKYTTDLTERARMGKLDPVIGRDDEIRRAIQILQRRSKNNPVLIGEPGVGKTAIVEGLAQRIVNDEVPESLRGKRVLSLD
MASLLAGAKFRGEFEERLKAVLKELAQDEGNNIVFIDEIHTMVGAGGAEGAIDAGNMLKPALSRGELHCIGATTLDEYRK
YIEKDAALERRFQKVLIDEPDVEATIAILRGLKERYEIHHGVEITDPAIVAAAELSNRYITDRFLPDKAIDLIDEAAARI
RMEIDSKPEVMDRLDRRIIQLKIEREAVRREDDEASKRRLQLIEDELAKLQREYDDYEQIWKAEKSSVHGVQSIREDIDK
VKAQMAEYQRQGEYEKLSELQYGKLPDLELRLKSAEKGEVKNQLLRTEVGTEEIAEVVSRATGIPVAKMMQGERAKLLTM
EDRLHERVVGQDEAVRLVSDAIRRSRAGLSDPSKPYGSFLFLGPTGVGKTELTKALANFLFDSDDHMVRIDMSEFMEKHT
VARLIGAPPGYIGYEEGGYLTEAIRRKPYSVILLDEIEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVIVMTSNIGS
QHIQKMSGEPYEKIKDVVWDELKNSFRPEFLNRIDEIVVFHGLEQDQIANIAKIQIKRLAQRLGQFEMKLEISDEAIAKI
AEAGFDPVFGARPLKRAIQQLIENPLSKRILQGEFTAKDTVKVDFDEESDQFTFNA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
STY0294 NP_454876.1 ClpB-like protein Not tested SPI-6 Protein 5e-103 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
clpB YP_007822289.1 chaperone protein ClpB VFG2076 Protein 8e-106 41