Gene Information

Name : CIY_28730 (CIY_28730)
Accession : YP_007820484.1
Strain : Butyrivibrio fibrisolvens 16/4
Genome accession: NC_021031
Putative virulence/resistance : Virulence
Product : Lysyl-tRNA synthetase (class II)
Function : -
COG functional category : -
COG ID : -
EC number : 6.1.1.6
Position : 2626239 - 2628284 bp
Length : 2046 bp
Strand : -
Note : -

DNA sequence :
ATGGCACAGCAGAACAATGGTGGCAGCCAGGATGTAAATCAGTTACTTCAGGTTCGCCGTGAAAAGCTTGCTGCACTTCA
GGAGGCAGGCAAGGACCCATTCCAGATTACAAAGTTTGACCAGACTCATCACACAGATGAGGCTAGAAATTTATATGAAG
AGCACGAGGCAAAGCTTCTTGCAGGTCGTCAGCCAGTTAATACAGATGGCATGGACGAAGAGGCTGCAAAGCAGGCAGTT
AACGACGATTACAATGAGCGTCGTGCTATTATGGATGCTCAGCCAATTCACGTTAGCATTGCTGGACGTATGATGTTCAA
GCGTGTTATGGGTAAGGCTAGCTTCTGCAACATCCGTGACCGCAAGGGTGATATTCAGGTTTATGTTGCTAGAGACGCAA
TCGGCGAGGAGCCATATGCAGATTTCAAGAAGTCTGATATCGGTGATATCTATGGTATCAAGGGTTGGGCTTTCAGAACA
AAGACAGGTGAGATTTCAATCCACGCTGAGGAGATGACTTTACTTTCTAAGTCACTTCAGATTCTTCCTGAGAAGTTCCA
CGGTCTTACAGATACAGATATGAGATATCGTCAGCGTTACGTTGATCTTGTTATGAACAAGGACTCACGTGATGTATTTG
TTAAGCGTTCACTTATGATGAAGGAAATCCGTAATTTCCTTGCAGAGCGTGATTTCATGGAAGTTGAGACACCTATCCTT
GTTTCAAATGCAGGTGGTGCAGCAGCTCGTCCATTCGAGACACACTACAACTCACTTAATGAGGATGTTAAGCTTCGTAT
CTCTCTTGAGCTTTACCTTAAGAGACTTATCGTTGGTGGTTTCGAGCGTGTTTACGAAATCGGCCGTGTATTCAGAAACG
AAGGTGTTGATACTCGTCACAATCCTGAGTTCACACTTATGGAGCTTTACCAGGCATACACAGATTACGAAGGTATGATG
GAGCTTACAGAGACAATGTTCCGTCGTCTTGCTGAAAAGGTTGTTGGTTCTACAAAGATTTCTTACAACGGAATCGAAAT
CGACCTTGGCAAGCCTTTCGAGAGAATGACAATGACAGATGCTGTAAAGAAGTTTGCAGGCGTTGATTTTGATACTATTG
CTGATGATGAGGCAGCAAAGGCTATCGCTCGTGAAAAGGGCGTTGAGTTTGAGGACCGTCACAAGAAGGGTGATATCCTT
AACCTCTTCTTCGAGGAATTCTGCGAGGAGAATCTTATCCAGCCTACATTTATTACAGATCATCCAATCGAGATTTCTCC
ACTTACAAAGAAGAAGCCTACAGACCCTACAAAGGTAGAGCGTTTCGAGCTCTTTATCAATACATGGGAGATGTGTAACG
CATACTCAGAGCTTAATGATCCTATCGACCAGCGTGAGCGTTTCGCTGCTCAGGATGCTAATGCAGCAGCTGGTGATGAT
GAGGCTGAGCACACAGATGAGGACTTCCTCAACGCACTTGAGATTGGTATGCCACCTACAGGCGGTATCGGATATGGTCT
TGATCGTCTCTGTATGTTACTTACAGATAGTCAGGCTATTCGTGATGTGCTTCTCTTCCCAACTATGAAGAGTCTTGATG
CACCAAAGAAGTCTGCTACAGCAGCTGATGACAAGAGCGGCTTCTTTGCTCCAAACTCAAGCATTGATTTCTCAAATGTA
GTTATCGAGCCATTATTTGAGGAGCAGGTTGATTTTGAGACATTCTCAAAGAGTGATTTCAGAGCTGTAAAGGTTAAGGC
TTGCCAGGCAGTACCAAAGTCAAAGAAGCTTCTTCAGTTTACACTTGATGATGGAACAGGCACAGATAGAACTATCCTTT
CAGGAATTCACGAGTTCTACGAGCCAGAAGAGCTTGTTGGTAAGACACTTGTAGCAATCACAAACCTTCCACCACGTGCT
ATGATGGGTATCGAGTCTTGCGGTATGTTACTTTCAGCAGTTAACAACCTTAAGGATTCAGATGGTGAAGAGCTTCACCT
TCTTATGATTGATAACCACATCCCAGCTGGTGCAAAATTGTATTAA

Protein sequence :
MAQQNNGGSQDVNQLLQVRREKLAALQEAGKDPFQITKFDQTHHTDEARNLYEEHEAKLLAGRQPVNTDGMDEEAAKQAV
NDDYNERRAIMDAQPIHVSIAGRMMFKRVMGKASFCNIRDRKGDIQVYVARDAIGEEPYADFKKSDIGDIYGIKGWAFRT
KTGEISIHAEEMTLLSKSLQILPEKFHGLTDTDMRYRQRYVDLVMNKDSRDVFVKRSLMMKEIRNFLAERDFMEVETPIL
VSNAGGAAARPFETHYNSLNEDVKLRISLELYLKRLIVGGFERVYEIGRVFRNEGVDTRHNPEFTLMELYQAYTDYEGMM
ELTETMFRRLAEKVVGSTKISYNGIEIDLGKPFERMTMTDAVKKFAGVDFDTIADDEAAKAIAREKGVEFEDRHKKGDIL
NLFFEEFCEENLIQPTFITDHPIEISPLTKKKPTDPTKVERFELFINTWEMCNAYSELNDPIDQRERFAAQDANAAAGDD
EAEHTDEDFLNALEIGMPPTGGIGYGLDRLCMLLTDSQAIRDVLLFPTMKSLDAPKKSATAADDKSGFFAPNSSIDFSNV
VIEPLFEEQVDFETFSKSDFRAVKVKACQAVPKSKKLLQFTLDDGTGTDRTILSGIHEFYEPEELVGKTLVAITNLPPRA
MMGIESCGMLLSAVNNLKDSDGEELHLLMIDNHIPAGAKLY

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAD66193.1 putative lysil-tRNA synthetase LysU Not tested PAI III 536 Protein 2e-101 48

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
CIY_28730 YP_007820484.1 Lysyl-tRNA synthetase (class II) VFG1668 Protein 1e-101 48