Gene Information

Name : CIY_19740 (CIY_19740)
Accession : YP_007819754.1
Strain : Butyrivibrio fibrisolvens 16/4
Genome accession: NC_021031
Putative virulence/resistance : Unknown
Product : conserved hypothetical protein TIGR00246
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1810817 - 1811296 bp
Length : 480 bp
Strand : -
Note : -

DNA sequence :
ATGAATATCAAGATTCTTTGTGTAGGAAAAATCAAAGAAAAATTCTATAGAGATGCTATAGATGAATATGTAAAACGTCT
TTCAAAATATTGTTCTGTAAGTGTTGTTGAGGTGCCGGATGAGAAAACTTCAGAAAATGCATCCGATAACGAGATAGCCA
TAGTAAAGGACAAGGAGGGAGAACGTTTACTTAAACACATAAGCGATAGAGATTATGTGATTGCTCTTGCAATCCTTGGA
AAACAGATGGATTCCGTTGTCTTTTCCAGATTTATTGAGGACTTAGGAATTCAGGGGAAGAGCTCACTTGTATTCGTTAT
TGGAGGTTCTTTAGGGTTATCTGACACAATCCTTAAATGTTCGGATTTTCAAATTTCTTTTTCCAAGATGACATTTCCTC
ATCAGCTTATGAGAGTTATTTTATCAGAGCAAATATATAGGGCTATGCGTATTATGAAAAACGAGCCTTATCATAAATAA

Protein sequence :
MNIKILCVGKIKEKFYRDAIDEYVKRLSKYCSVSVVEVPDEKTSENASDNEIAIVKDKEGERLLKHISDRDYVIALAILG
KQMDSVVFSRFIEDLGIQGKSSLVFVIGGSLGLSDTILKCSDFQISFSKMTFPHQLMRVILSEQIYRAMRIMKNEPYHK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
orfX YP_251938.1 rRNA large subunit methyltransferase Not tested SCCmec Protein 1e-40 55
SE0023 NP_763578.1 rRNA large subunit methyltransferase Not tested SCCpbp4 Protein 3e-40 54
SERP2529 YP_190070.1 rRNA large subunit methyltransferase Not tested Type-II SCCmec Protein 3e-40 54
unnamed BAA82243.1 orfX Not tested Type-II SCCmec Protein 3e-40 53
orfX AAL26648.1 unknown Not tested SCCcap1 Protein 2e-39 53
SAR0024 YP_039501.1 rRNA large subunit methyltransferase Not tested Type-II SCCmec Protein 5e-40 53
unnamed BAD24821.1 conserved hypothetical protein orfX Not tested Type-V SCCmec Protein 3e-40 53
orfX BAA86653.1 open reading frame X Not tested Type-I SCCmec Protein 3e-40 53
SAV0024 NP_370548.1 rRNA large subunit methyltransferase Not tested Type-II SCCmec Protein 5e-40 53
unnamed BAG06184.1 conserved hypothetical protein orfX Not tested Type-VII SCCmec Protein 3e-40 53
unnamed BAB47681.1 open reading frame X Not tested Type-III SCCmec Protein 3e-40 53
SSP0026 YP_300116.1 rRNA large subunit methyltransferase Not tested SCC15305RM Protein 4e-40 53
unnamed BAC53844.1 open reading frame X Not tested SRImec-III and SCCmec-III region Protein 3e-40 53
unnamed BAC57492.1 hypothetical protein Not tested Type-IIIinv SCCmec Protein 3e-40 53
unnamed BAB72121.1 hypothetical protein Not tested Type-IVa SCCmec Protein 3e-40 53
unnamed BAB72138.1 open reading frame X Not tested Type-IVb SCCmec Protein 3e-40 53
unnamed BAC67575.1 open reading frame X Not tested Type-IVc SCCmec Protein 3e-40 53
orfXhom BAB83497.1 open reading frame X Not tested SCC 12263 Protein 2e-37 53
unnamed ACL99851.1 hypothetical protein Not tested Type-V SCCmec Protein 1e-25 53