Gene Information

Name : AL1_22230 (AL1_22230)
Accession : YP_007817261.1
Strain : Alistipes shahii WAL 8301
Genome accession: NC_021030
Putative virulence/resistance : Virulence
Product : ATP-dependent chaperone ClpB
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2518394 - 2520991 bp
Length : 2598 bp
Strand : +
Note : -

DNA sequence :
ATGAACATCAACACTCTTACTATCAAGGCGCAGGAGGCGCTGCAAGCGGCGCTCTCACTGGCGCGGGAGCGGGGACAGCA
GGCTGTCGAACCGCTCCACCTGCTCGCGGCGCTGATCCGCGAGGACGATTCGCTCTCGACGTTCCTGCTGGGGCGCGTGG
GAGTGAATGTACGTTCGCTGCGCGACGAGGTCGGCCGGGCCGTGGCGTCGCTGCCGCGCGTCGAGGGCGGCGGCGAGCAG
TTCTTTGCGCAGGACACCTCGAAGGCGATCCAGCGCGCCGTGGACTTCACGAAGAATTTCGGCGACAAATACGCCTCCGT
CGAACACCTGCTGCTGGCCCTCGTGGCCGAGCGCGGGCAGGCCGCCGACATCCTCAAACGCAGCGGCGCGACGGAAAAGG
AGCTGATTGAGGCGATCCGCACCTTCCGCAAGGGTGCGACGGTCGATTCGCAGACCTCCGAGCAGCAGTTCGACGCGCTG
GGCAAGTATGCCATCAACCTCAACGAGCAGGCGCGCTCGGGAAAACTCGACCCGGTCATCGGGCGTGACGAGGAGATCCG
CCGCGTGCTGCAAATCCTTTCGCGGCGCACGAAGAACAATCCGATTCTCGTGGGCGAGGCCGGCGTCGGCAAAACCGCCA
TCGCCGAGGGCATCGCCCGCAGGATCATCGACGGCGACGTGCCCGAGAACCTGAAGTCGAAGGTCATCTACTCGCTGGAC
ATGGGTGCGCTGATCGCAGGCGCCAAGTATCAGGGCGAGTTCGAGGAGCGTCTGAAAGCCGTCGTGCAGGAGGTTACGGC
CAGCGAGGGCGAGATACTGCTCTTCATCGACGAGATCCACACGCTGGTCGGCGCCGGCAAGTCGTCGGGGGCGATGGATG
CCGCGAACATCCTCAAACCGGCCCTTGCGCGGGGCGAGCTGCGGACCATCGGAGCCACGACGCTCGACGAGTTCCAGAAA
TACTTCGAGCAGGACAAGGCCCTCGAACGCCGTTTCCAGAAGGTGATGGTCGACGAGCCTTCGCAGGAGGACGCCATCTC
GATCCTCCGCGGCCTGAAGGAGCGTTACGAAAACCACCACCAGGTGCGGATCAAGGACGAGGCCATCGTGGCCGCCGTCG
AGCTTTCGACGCGCTACATCACCTCGCGGTTCCTGCCCGACAAGGCCATCGACCTGGTGGACGAGGCCGCCTCGCGGCTG
CGTCTGGAGATGAACTCCGTGCCCGAGGAGATCGACACGCTCGACCGCCGGGTCCGCCAGCTCGAAATCGAACGCGAGGC
CATCCGCCGCGAGAAGGACAAGGAGCGCGTCGAGCACCTGACCAAGGAGATCGAGGAACTGAAGGCCCGTGACGCCGAGA
TGCGTGCCAGGTGGCAGGGCCAGCGCGATCTGCTCAAAAAGATTCAGGCCAACAAGGATAAGATCGAGTCGCTGAAAGTC
GAGGCCCAGCAGGCCGAACGGCAGGGCGACTACGGCAAGGTGGCCGAAATCCGCTACGGCAAGATTCAGGAGGCCGAGAA
GGAGATCGCCGCTTTTCAGGAGGAGTACCGCCTCGCTTCGGCCAGCGGTTCGATGATCAAGGAGGAGGTCGACGCGCAGG
ACGTTGCCGAGGTGGTGTCGCGCTGGACGGGCATTCCCGTGACGCGCATGCTGGCCTCGGAGCGCGAGAAACTGCTCCAC
ATGGAGGACGAACTCCACAAGCGCGTCATCGGGCAGGAGCAGGCCATCGCGGCCATTTCCGACGCCGTGCGCCGTTCGCG
CGCCGGGCTGAACGATCCCCGCAAGCCGATCGGTTCGTTCATCTTCCTCGGTACGACGGGCGTCGGCAAGACCGAGCTGG
CCAAGGCGCTGGCCGAGTTCCTGTTCAACGACGACCAGATGATGACGCGTATCGACATGAGCGAGTACCAGGAGCGGCAC
GCCGTGTCGCGGCTCGTCGGGGCGCCTCCGGGATACGTCGGTTACGACGAGGGCGGCCAATTGACCGAGGCCGTGCGGCG
CAAGCCCTATTCCGTGGTGCTGCTCGACGAGATCGAGAAGGCGCATCCCGACGTCTTCAACATCCTGTTGCAGGTGCTCG
ACGACGGCCGGCTGACCGACAACAAGGGCCGTACGGTGGATTTCCGCAACACGATCATCATTATGACCTCGAACATGGGT
TCGCAGGTGATCCAGGATAACTTCGCCGAGGCCTTCGACGGCAGGAAGCTGCCCGAAGAGGTTGTCGAGCGGACGCGCCT
CGCGGTGATCGACCTGCTGAAACAGCAACTCAAACCGGAGTTCCTGAACCGTATCGACGAGATCGTGATGTTTGAGCCGC
TGACGCACAAGGACATCGAACGCATCGTCGACATCCAGTTGGGCATCGTGCGCAGGATGCTTTCGGAGAACGGCATCCGG
CTGGAGTACAGCGACAAGGCGCGCGAATGGATCGCCTCGGCGGGTTACGATCCGCTCTATGGCGCACGTCCCGTGAAGCG
GGTCATCCAGCGCTATGTGGTCAACGACCTTTCGAAGCGGATTCTTGCCGGCGAGGTCGACCGCTCGAAGCCGATCGCGA
TTGACGCCGGGCAGGACGGGCTGACGTTCTCGAACTGA

Protein sequence :
MNINTLTIKAQEALQAALSLARERGQQAVEPLHLLAALIREDDSLSTFLLGRVGVNVRSLRDEVGRAVASLPRVEGGGEQ
FFAQDTSKAIQRAVDFTKNFGDKYASVEHLLLALVAERGQAADILKRSGATEKELIEAIRTFRKGATVDSQTSEQQFDAL
GKYAINLNEQARSGKLDPVIGRDEEIRRVLQILSRRTKNNPILVGEAGVGKTAIAEGIARRIIDGDVPENLKSKVIYSLD
MGALIAGAKYQGEFEERLKAVVQEVTASEGEILLFIDEIHTLVGAGKSSGAMDAANILKPALARGELRTIGATTLDEFQK
YFEQDKALERRFQKVMVDEPSQEDAISILRGLKERYENHHQVRIKDEAIVAAVELSTRYITSRFLPDKAIDLVDEAASRL
RLEMNSVPEEIDTLDRRVRQLEIEREAIRREKDKERVEHLTKEIEELKARDAEMRARWQGQRDLLKKIQANKDKIESLKV
EAQQAERQGDYGKVAEIRYGKIQEAEKEIAAFQEEYRLASASGSMIKEEVDAQDVAEVVSRWTGIPVTRMLASEREKLLH
MEDELHKRVIGQEQAIAAISDAVRRSRAGLNDPRKPIGSFIFLGTTGVGKTELAKALAEFLFNDDQMMTRIDMSEYQERH
AVSRLVGAPPGYVGYDEGGQLTEAVRRKPYSVVLLDEIEKAHPDVFNILLQVLDDGRLTDNKGRTVDFRNTIIIMTSNMG
SQVIQDNFAEAFDGRKLPEEVVERTRLAVIDLLKQQLKPEFLNRIDEIVMFEPLTHKDIERIVDIQLGIVRRMLSENGIR
LEYSDKAREWIASAGYDPLYGARPVKRVIQRYVVNDLSKRILAGEVDRSKPIAIDAGQDGLTFSN

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
STY0294 NP_454876.1 ClpB-like protein Not tested SPI-6 Protein 2e-110 42
aec27 AAQ96721.1 Aec27 Not tested AGI-1 Protein 4e-103 42
aec27 YP_851418.1 ATPase Not tested PAI II APEC-O1 Protein 5e-103 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
AL1_22230 YP_007817261.1 ATP-dependent chaperone ClpB VFG2084 Protein 1e-109 45
AL1_22230 YP_007817261.1 ATP-dependent chaperone ClpB VFG2076 Protein 1e-122 44