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Name : AL1_19090 (AL1_19090) Accession : YP_007817023.1 Strain : Alistipes shahii WAL 8301 Genome accession: NC_021030 Putative virulence/resistance : Unknown Product : type I site-specific deoxyribonuclease, HsdR family Function : - COG functional category : - COG ID : - EC number : 3.1.21.3 Position : 2180181 - 2183222 bp Length : 3042 bp Strand : + Note : - DNA sequence : ATGCACTTCACCGAAGATGATTTTGAAAACGCCATTCTCGAGTTGTTTCGAGAGCAATTAGGTTACGATTATGTGTACGG CCCCAATGTGATACGCGACTATGCAGAACCGCTTTACGTGGAGGCGCTGGAGGCTGTGTTGCCGCAGATCAATCGTGGTC TGCCACAGGCCGCTATTGACGAAGCCATGGTGAAGATTCGAACTTATGAGGGTGGAACGTTGGTACAGAAGAATGAATTG TTCACGGATTACTTGCAAAATGGCGTAGCTGTCAATTATTTCGATGGCCGCGAGCAATGCTCTGCAAATGTCCGGCTTGT CGATTATGATTCACCATTACATAATCGGTTTACAATCGCTAATCAATGGACGGTCGATGGGCACTCGGTAAGGCGTGCGG ATATGATCGTATTTGTCAATGGATTGCCGCTGGTGGTGGTCGAGCTCAAATCGCCCTCGCGTGAGAATACGGACGTGTCG GAAGCTTATGCACAATTGCGTAACTATATGCAGGAGATTCCGTCACTCTTTATCTATAACGCTTTTTGTGTGATGAGCGA TCAGGGGATGACTAAGGCGGGGACGATCACGGCGGGTGAAGACCGTTTTATGCAGTGGAAGACGGTGGATGGGAGTTATG AGGATACCCATAGCGCGAATTTCGATGTGCTTTTCGCGGGAATGTTCGAAAAAACGCGGTTTGTTGAATTGTTGCGGAAT TTTATTTGCTACTCGAAAGACGGTAAACAGCGCGTTAAGATATTAAGTGCCTATCATCAGTTTTATGCCGTACGCAAGGC TGTGCTTTCGACGGTCAAAGCAGCTGAGACGGATGGTCGGGGTGGCGTGTTTTGGCATACGCAGGGCAGCGGAAAGTCAT TGTCGATGGTCTTTTTCGCCAAGCAGTTGCAGCAGGCGATGTCGTCGCCGACGATTGTCGTGCTGACAGACCGTAACGAT TTGGACGGCCAGTTGTACCGGCAGTTCGCTTGTTGCAGGGATTTTTTGCGTCAGACACCCGTGCAAGCCGAAAGTCGGGC TCATCTTCGGGAATTATTGGCGGGACGCGAAGCGAACGGTATCTTTTTCTCGACGATGCAGAAATTCGAGGAGAGCGAAG AACCGCTTTCGATACGACGAAACATAGTCGTTATGGCCGACGAGGCGCATCGCAGTCAATATGGATTGGAGGAGAGGGTC CGAATGGTTACGGATGCTGACGGGGTGATGCAGGCCAAAGTTGTAATCGGCGCGGCGCGTCTGGTGCGTAATGCGTTGCC GAATGCTACCTATATCGGGTTTACCGGAACGCCTATTGCGCAAAAAGATCGGTCGACACGCGAAGTATTCGGCGATTACA TCGACGTGTACGATATGACGCAGTCGGTGGATGACGGTGCGACACGGCCGGTATTTTACGAGAGCCGTGTAATCAATCTG AAACTCGACGAGCAGACCTTGCGACGTATTGATGCGGAGTATGATGCGATGGCCGAGGAAGCGGAAGAGTATGTCATTGA GAAAAGCAAGCGTGAATTGGGGCGGCTCGATTCGATCTTTGGAGCTGACGCGACGGTGGCATCATTGTGCGAGGACATCG TAAAACACTATGAGGAATTCCGGCAATACGAGCAGACGGGTAAGGCGATGATAGTAGCCTATTCGCGGCCGATAGCGATC AAGATTTACCGTCGGATTCTCGAAATGCGCCCGGTATGGGGTGACAAGCTGGCTGTTGTGATGACTTCCGGTAATAAAGA TCCGGAAGACTGGCGGGCGATTATCGGAAATGATTCCCACAAGAAAGAGTTGGAGAAGAGGTTCAAAGACAACGACAGCT CGTTGAAAATCGTCATCGTAGTTGATATGTGGCTTACGGGTTTCGACGTACCTTCGCTTTCGACGATGTATGTTTATAAA CCGATGTCCGGACACAATCTAATGCAGGCTATTGCTCGTGTGAATCGTGTGTTCGGGGATAAACAAGGCGGTTTGGTTGT GGATTATGTGGGTATCGCTTCGGCGTTGAAGACGGCGATGAACGATTATACATACCGTGACCGCAAAAATTATGGTGATA CGGATGTGGCTAAAACCGCCTATCCGGAGTTTCAAAAGAAACTGGACGTTTGCCGTGATCTGATGTATGGATTCAATTAT GGCGCTTTCTTCGGTAAGTCTGATTTGGAGCGGGCGAAAGCCATCAGCGGAGGTGTCGATTTCATGCAGTCCCCTGAGCG GATGGAAACGAAAAAACTCTATATCAAAGAGGCGCTGCTGCTGCGGCAGGCATTGTCGCTTTGTCAGAGTTTGCTGAATT ACGAGCAGCGTATCGAAGCTGCCTATTTTGAGGCGGTGCGCACATTACTGACGCGCGTGGAGGGCAAGGGTAAGATTTCG TTCCGTGAGATCAACGGGCGTATTAATGAATTGCTCAAGCAGAGTATCAAGAGCGAAGGGGTAATTAATCTTTTCTCCGA TATTAAGGAGGAGTTCTCTTTGTTCGATCCGAAATTCCTTGAAGAGGTTGCCCGGATGAAGGAACGGAATTTCGCCGTAG AATTATTGCGTAGGTTGATTGCAGAACAGGTACAACTATATCAGCGAACGAATACGGTACGAGCCGAGAAGTTTTCGGAA ATTCTGTCCGATGCCATGAGTCGCTATTTGAAAGGGATGCTGACGAACGAAGAGGTTATCGAAGAATTACTGAAAATAGC CCGTGAGATCGTTTTCGGCGAAAAGGCCGGCGAGTCGCTTAATCTGAACAGCGAAGAACTTGCCTTTTATGATGCGTTGA CCAAGCCTGAGGCTGTAAAAGATTTCTATTCCAACGATCAGTTGATCGCTATTACACGTGAGCTGACGGATGCACTCCGG CGTAACAAAACGATCGACTGGAATATGAAGGAGAGTGCTCGTGCCGGAATGCGGCGTATTGTCAAACGGTTGTTGAAAAA GTATGATTATCCGCCTGCAGGGCAGGAAGATGCTTTGAATACGATTATGGAGCAGTGTAAGAAGTGGAACGAAAATAATT GA Protein sequence : MHFTEDDFENAILELFREQLGYDYVYGPNVIRDYAEPLYVEALEAVLPQINRGLPQAAIDEAMVKIRTYEGGTLVQKNEL FTDYLQNGVAVNYFDGREQCSANVRLVDYDSPLHNRFTIANQWTVDGHSVRRADMIVFVNGLPLVVVELKSPSRENTDVS EAYAQLRNYMQEIPSLFIYNAFCVMSDQGMTKAGTITAGEDRFMQWKTVDGSYEDTHSANFDVLFAGMFEKTRFVELLRN FICYSKDGKQRVKILSAYHQFYAVRKAVLSTVKAAETDGRGGVFWHTQGSGKSLSMVFFAKQLQQAMSSPTIVVLTDRND LDGQLYRQFACCRDFLRQTPVQAESRAHLRELLAGREANGIFFSTMQKFEESEEPLSIRRNIVVMADEAHRSQYGLEERV RMVTDADGVMQAKVVIGAARLVRNALPNATYIGFTGTPIAQKDRSTREVFGDYIDVYDMTQSVDDGATRPVFYESRVINL KLDEQTLRRIDAEYDAMAEEAEEYVIEKSKRELGRLDSIFGADATVASLCEDIVKHYEEFRQYEQTGKAMIVAYSRPIAI KIYRRILEMRPVWGDKLAVVMTSGNKDPEDWRAIIGNDSHKKELEKRFKDNDSSLKIVIVVDMWLTGFDVPSLSTMYVYK PMSGHNLMQAIARVNRVFGDKQGGLVVDYVGIASALKTAMNDYTYRDRKNYGDTDVAKTAYPEFQKKLDVCRDLMYGFNY GAFFGKSDLERAKAISGGVDFMQSPERMETKKLYIKEALLLRQALSLCQSLLNYEQRIEAAYFEAVRTLLTRVEGKGKIS FREINGRINELLKQSIKSEGVINLFSDIKEEFSLFDPKFLEEVARMKERNFAVELLRRLIAEQVQLYQRTNTVRAEKFSE ILSDAMSRYLKGMLTNEEVIEELLKIAREIVFGEKAGESLNLNSEELAFYDALTKPEAVKDFYSNDQLIAITRELTDALR RNKTIDWNMKESARAGMRRIVKRLLKKYDYPPAGQEDALNTIMEQCKKWNENN |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| hsdR | YP_251977.1 | type I restriction-modification system restriction subunit | Not tested | SCCmec | Protein | 0.0 | 42 |
| hsdR | BAH57699.1 | type I restriction-modification system endonuclease homologue | Not tested | Type-VII SCCmec | Protein | 0.0 | 42 |
| hsdR | BAD24840.1 | type I restriction-modification system endonuclease homologue | Not tested | Type-V SCCmec | Protein | 0.0 | 42 |
