Gene Information

Name : AL1_18440 (AL1_18440)
Accession : YP_007816972.1
Strain : Alistipes shahii WAL 8301
Genome accession: NC_021030
Putative virulence/resistance : Virulence
Product : Nucleoside-diphosphate-sugar epimerases
Function : -
COG functional category : -
COG ID : -
EC number : 5.1.3.2
Position : 2093611 - 2094585 bp
Length : 975 bp
Strand : -
Note : -

DNA sequence : 
ATGTCTTATAAGCAATTGAAATTTCCTGAAGCCTCTCTATTTTTGGTTACGGGCGGAGCAGGATTTATTGGTTCCAACTT
ATGTGAGGCTATTTTGAATCTTGGGTATCGAATTCGTTGTCTGGATGACTTATCTACGGGGAAACAAGCTAATATTGACT
TATTCCTCGGGCATCCAAATTACGAATTTATTCAAGGAGACATCAAAGATCTCCAAACCTGTATCGACGCATGCAAGAAT
GTTGATTATGTCCTCCATCAGGCAGCATGGGGAAGCGTCCCCCGCTCATTGGAAATGCCGTTATTCTACTCGCTGAACAA
TATTCAGGGAACGCTGAACATGCTTGAAGCAGCCAGGCAGAACGGAGTCAAGAAGTTTGTTTATGCCTCCAGTTCATCCG
TATATGGCGACGAACCGGTTCTACCCAAAGAAGAGGGGCATGAAGGCAATCTACTCTCGCCCTACGCCGTAACCAAGAGG
TGTGACGAGGAGTGGGCTAAACAGTACACTCGTCACTATGGCCTAGACACCTACGGCATGCGCTATTTCAATGTTTTCGG
GCGCAGACAGGATCCCGACGGTGCGTATGCCGCTGTACTGCCCAAGTTCATCAAGATGCTTTTGAATAACGAGCAGCCGA
CCATCAACGGAGACGGCCGACAAAGCCGGGATTTTACCTATATCGAGAACGTCATCGAAGCCAATCTCAAAGCATGTCTT
GCATCCACGGAAGCAGCAGGCAAGGCATTCAATATCGCATACGGCGGTCGAGAATACTTGATCGACATCTACCATACGCT
CACCCGGGTATTAGGCAAAAATATCGAACCTCATTTCGGCCCCGATCGCAAAGGCGACATCAAACACTCAAATGCCGACA
TCTCCCAAGCACGCAAACTCTTGGGCTATGACCCCGAATACGACTTCGCACGAGGGCTGGCAGAGAGTATCGAATGGTAT
AAAAATAATCTTTAA

Protein sequence : 
MSYKQLKFPEASLFLVTGGAGFIGSNLCEAILNLGYRIRCLDDLSTGKQANIDLFLGHPNYEFIQGDIKDLQTCIDACKN
VDYVLHQAAWGSVPRSLEMPLFYSLNNIQGTLNMLEAARQNGVKKFVYASSSSVYGDEPVLPKEEGHEGNLLSPYAVTKR
CDEEWAKQYTRHYGLDTYGMRYFNVFGRRQDPDGAYAAVLPKFIKMLLNNEQPTINGDGRQSRDFTYIENVIEANLKACL
ASTEAAGKAFNIAYGGREYLIDIYHTLTRVLGKNIEPHFGPDRKGDIKHSNADISQARKLLGYDPEYDFARGLAESIEWY
KNNL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
tviC NP_458739.1 Vi polysaccharide biosynthesis protein, epimerase Virulence SPI-7 Protein 6e-59 49
tviC NP_807944.1 VI polysaccharide biosynthesis epimerase Virulence SPI-7 Protein 6e-59 49

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
AL1_18440 YP_007816972.1 Nucleoside-diphosphate-sugar epimerases VFG0430 Protein 3e-59 49