Gene Information

Name : AL1_18430 (AL1_18430)
Accession : YP_007816971.1
Strain : Alistipes shahii WAL 8301
Genome accession: NC_021030
Putative virulence/resistance : Virulence
Product : nucleotide sugar dehydrogenase
Function : -
COG functional category : -
COG ID : -
EC number : 1.1.1.-
Position : 2092320 - 2093591 bp
Length : 1272 bp
Strand : -
Note : -

DNA sequence :
ATGAAAAAGACCAAAATCTGCGTAATCGGACTTGGGTACGTCGGACTCCCCCTTGCCCGTCTGTTCTCCACGAAATACGA
GACTATCGGATTCGATATGAATGCAAGGCGCTGCGAGGCGCTGATGGCAGGGCACGATGCCACATTGGAAGTAAGCGATG
AACTGCTACAAGACGCCATCAATAACTATGGATTTGTTTGCACATCTGATATTGAGCGGATTAAAGACTGCAACTTTTAT
GTAGTAGCGGTTCCAACGCCCGTAGATGAGAACAATAATCCAGACTTAGCACCGCTTTATGGCGCATCAACCACCGTCGG
AAAGGTCATCTCGAAAGGAGACGTCGTAGTCTACGAATCGACAGTCTATCCTGGTGTTACCGAAGACGAGTGTATTCCTG
TCGTAGAGAGTGTCAGCGGACTAAAATTTAACGAGGATTTCTTTGCTGGCTATAGCCCCGAACGCATTAACCCGGGTGAT
AAGCAGCATACCGTAGAGAAAATCAAGAAGGTGACCTCGGGGTCAACACCCGAGATTGGACAATATGTCAATTCTGTCTA
CTCCTCAGTCATTATAGCCGGAACACACCTCGCACCTTCAATTAAGGTTGCGGAAGCAGCTAAGGTCATAGAAAATTCAC
AACGCGACATTAATATCGCTTTTGTAAACGAGCTCTCGAAAATCTTCACCCGTATGGGTATCGACACGCAGGATGTGTTG
GAGGCAGCCTCTACTAAATGGAACTTCCTGCCTTTCAAACCGGGCCTGGTCGGTGGACACTGCATCGGGGTGGATCCGTA
CTATTTAGCACAATGCGCACAGCGCCACGGATATAATCCCGAGATTATCCTTGCAGGCCGACGCATGAACGATGGCATGG
GTGAATACGTAGCAGATCGAACAGTAAAACTGATGATCAAGAAAGGTATACAGGTATACGGCAGCAAAATTCTTATTTTG
GGCTTCACATTCAAGGAGAACTGCCCAGACGTAAGAAACACTAAGGTCATAGACATCTACAAAGCTCTTATAGAGTATAA
TGTTCAAATCACCGTCTATGACCCTTGGGCCAACCCTGAAGCTGTATGCCACGAATACGGTATCAAGGTAATTAATGAAC
TTCCAGCGGAGGAGAAATTCGACGCAGTCATCGTTGCCGTAGCGCATAAAAAATTTGAGAACATCGATATTTCTTCATAT
CTAAAGGATACACACATCATCTTCGATGTTAAAGCCACCTGCGACCGAAACTCTATCGATGGAAGGTTATGA

Protein sequence :
MKKTKICVIGLGYVGLPLARLFSTKYETIGFDMNARRCEALMAGHDATLEVSDELLQDAINNYGFVCTSDIERIKDCNFY
VVAVPTPVDENNNPDLAPLYGASTTVGKVISKGDVVVYESTVYPGVTEDECIPVVESVSGLKFNEDFFAGYSPERINPGD
KQHTVEKIKKVTSGSTPEIGQYVNSVYSSVIIAGTHLAPSIKVAEAAKVIENSQRDINIAFVNELSKIFTRMGIDTQDVL
EAASTKWNFLPFKPGLVGGHCIGVDPYYLAQCAQRHGYNPEIILAGRRMNDGMGEYVADRTVKLMIKKGIQVYGSKILIL
GFTFKENCPDVRNTKVIDIYKALIEYNVQITVYDPWANPEAVCHEYGIKVINELPAEEKFDAVIVAVAHKKFENIDISSY
LKDTHIIFDVKATCDRNSIDGRL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
tviB NP_458740.1 Vi polysaccharide biosynthesis protein, UDP-glucose/GDP-mannose dehydrogenase Virulence SPI-7 Protein 8e-114 56
tviB NP_807945.1 VI polysaccharide biosynthesis UDP-glucose/GDP-mannose dehydrogenase Virulence SPI-7 Protein 8e-114 56
cap1L AAA64651.1 type 1 capsule synthesis gene Virulence SCCcap1 Protein 2e-98 53

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
AL1_18430 YP_007816971.1 nucleotide sugar dehydrogenase VFG0431 Protein 3e-114 56