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Name : lysS (SPN994038_06360) Accession : YP_007812463.1 Strain : Streptococcus pneumoniae SNP994038 Genome accession: NC_021026 Putative virulence/resistance : Virulence Product : lysyl-tRNA synthetase Function : - COG functional category : - COG ID : - EC number : - Position : 638291 - 639781 bp Length : 1491 bp Strand : + Note : - DNA sequence : ATGTCTACAGAACATATGGAAGAACTAAATGACCAGCAGATCGTTCGCCGTGAAAAAATGGCTGCGCTCCGCGAACAAGG AATCGATCCTTTCGGAAAACGTTTTGAACGTACTGCAAATTCACAAGAATTAAAAGATAAATATGCCAACCTCGATAAAG AACAATTACACGATAAAAACGAAACAGCTACTATCGCAGGACGCTTGGTAACCAAACGTGGTAAAGGAAAAGTTGGTTTT GCCCACCTTCAAGACCGCGAAGGCCAGATTCAGATCTACGTTCGTAAGGATGCTGTCGGTGAAGAAAACTACGAAATCTT CAAAAAAGCAGACCTTGGTGACTTCCTTGGTGTCGAAGGTGAAGTGATGCGTACGGATATGGGAGAACTCTCTATCAAGG CAACCCACATCACACACTTGTCTAAGGCTCTTCGTCCTCTTCCTGAGAAATTCCATGGTTTGACAGACGTTGAAACAATT TACCGTAAACGTTACCTTGACTTGATTTCTAATCGTGAAAGCTTTGAACGCTTTGTCACTCGTTCAAAAATCATCTCTGA AATCCGTCGTTACCTTGACCAAAAAGGATTCCTTGAAGTGGAAACACCTGTTCTTCATAATGAAGCCGGTGGTGCTGCTG CCCGTCCATTTATCACCCACCACAATGCCCAAAACATTGACATGGTGCTTCGTATCGCGACTGAGCTTCACTTAAAACGC CTTATCGTGGGTGGTATGGAACGTGTCTATGAAATTGGCCGTATCTTCCGTAACGAAGGAATGGACGCTACTCATAACCC TGAGTTCACTTCTATCGAAGTTTACCAAGCTTATGCAGACTTCCAAGACATCATGGACTTGACTGAAGGCATTATCCAAC ACGCTGCTAAATCAGTCAAAGGTGATGGCCCAGTCAACTACCAAGGTACTGAAATCAAGATTAACGAACCATTTAAGCGT GTTCATATGGTGGATGCTATCAGAGAAATTACTGGTGTCGATTTCTGGCAAGACATGACTTTGGAAGAAGCTAAAGCTAT CGCTGCTGAGAAGAAAGTTCCAGTTGAGAAACACTACACTGAGGTTGGTCACATCATCAATGCCTTCTTTGAAGAGTTTG TTGAAGAAACTTTAATCCAACCAACCTTTGTCTATGGACATCCAGTAGCTGTATCTCCACTCGCTAAGAAAAATCCTGAA GACCAACGCTTTACTGACCGTTTCGAGCTCTTTATCATGACTAAGGAGTACGGTAATGCCTTTACTGAGTTGAACGACCC AATCGACCAACTTAGCCGTTTTGAAGCCCAAGCTAAAGCTAAAGAACTTGGTGATGATGAAGCGACAGGCATCGACTATG ACTACATCGAGGCTCTTGAATACGGTATGCCACCAACAGGTGGTTTGGGAATCGGTATCGACCGTCTCTGCATGCTCCTC ACTGATACAACAACTATCCGTGATGTATTGCTCTTCCCAACAATGAAATAA Protein sequence : MSTEHMEELNDQQIVRREKMAALREQGIDPFGKRFERTANSQELKDKYANLDKEQLHDKNETATIAGRLVTKRGKGKVGF AHLQDREGQIQIYVRKDAVGEENYEIFKKADLGDFLGVEGEVMRTDMGELSIKATHITHLSKALRPLPEKFHGLTDVETI YRKRYLDLISNRESFERFVTRSKIISEIRRYLDQKGFLEVETPVLHNEAGGAAARPFITHHNAQNIDMVLRIATELHLKR LIVGGMERVYEIGRIFRNEGMDATHNPEFTSIEVYQAYADFQDIMDLTEGIIQHAAKSVKGDGPVNYQGTEIKINEPFKR VHMVDAIREITGVDFWQDMTLEEAKAIAAEKKVPVEKHYTEVGHIINAFFEEFVEETLIQPTFVYGHPVAVSPLAKKNPE DQRFTDRFELFIMTKEYGNAFTELNDPIDQLSRFEAQAKAKELGDDEATGIDYDYIEALEYGMPPTGGLGIGIDRLCMLL TDTTTIRDVLLFPTMK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | CAD66193.1 | putative lysil-tRNA synthetase LysU | Not tested | PAI III 536 | Protein | 2e-107 | 46 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| lysS | YP_007812463.1 | lysyl-tRNA synthetase | VFG1668 | Protein | 1e-107 | 46 |
