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Name : lysS (MMS_A0070) Accession : YP_007810852.1 Strain : Mycoplasma mycoides Gladysdale Genome accession: NC_021025 Putative virulence/resistance : Virulence Product : lysine--tRNA ligase Function : - COG functional category : - COG ID : - EC number : 6.1.1.6 Position : 78326 - 79828 bp Length : 1503 bp Strand : + Note : identified by match to protein family HMM PF00152; match to protein family HMM PF01336; match to protein family HMM TIGR00499 DNA sequence : ATGTTAGATAATAGAAAATTTAGTGAACAAGAATTAGTCAGAAGAAATAAATATAAAACTTTAGTTGAACAAAACAAAGA TCCTTATAAAGTTACTAATTGAAAAAGAAACACTACATTATTAAAGTTAAATGAAAAATATAAAGATTATAGTAAAGAAG ATTTATTAAATTTAAATCAAGAATTAGTAGTAGTTGCTGGAAGAATTAAATTATATAGAGAGGCTGGTAAAAAAGCTGCT TTTGTTAATATTGATGACCAAGATTCAAGTATTCAATTATATGTAAGATTAGATGAAATAGGTGATCAATCTTTTGAAGA TTTTAGAAACTTCGATTTAGGAGATATTATTGGGGTTAAAGGAATCATGATGAGAACTGATCATGGCGAACTTTCAATTA GATGTAAAGAAGTTGTTTTATTATCTAAAGCTTTAAGACCACTACCTGATAAACACGCTGGAATTCAAGATATAGAAGAA AAATATCGTAGAAGATATGTTGATTTAATTGTAAATCATGACGTTAGAAAAACATTTCAAGCTCGAACTAAAATAATAAG AACTTTACAAAACTTTTTAGATAATAAAGGTTATATGGAAGTTGAAACTCCGATTTTACATTCATTAAAAGGAGGAGCTT CTGCTAAGCCTTTTATTACTCACTATAATGTTTTAAATACTGATGTTTATTTAAGAATAGCTACAGAACTACATTTAAAA CGTTTAATTGTTGGTGGTTTTGAAGGGGTTTATGAAATAGGTCGTATTTTTAGAAATGAAGGAATGAGTACTCGCCACAA TCCTGAATTTACAAGTATTGAATTATATGTTGCTTATGAAGATATGTTCTTTTTAATGAATTTAACAGAAGAAATTTTTA GAGTATGTAATGCTGCAGTTAATTCAAATTCTATAATTGAATATAATAATGTAAAAATCGATCTATCAAAACCATTTAAA AGATTACATATGGTTGATGGTATTAAACAAGTAACAGGTGTTGATTTTTGAAAAGAAATGACTGTACAACAAGCTTTAGA ATTGGCTAAAAAACATAAAGTTCATGTTGAAAAACATCAAGAATCAGTTGGACATATTATTAATTTATTTTATGAAGAAT TTGTTGAATCAACTATTGTTGAACCAACTTTTGTTTATGGTCATCCAAAAGAAATTTCTCCACTAGCAAAATCTAATCCA AGCGATCCAAGATTTACTGATAGATTTGAATTGTTTATTCTTGGAAGAGAATATGCTAATGCATTTAGTGAGTTAAACGA TCCAATTGATCAATATGAAAGATTTAAAGCTCAAATTGAAGAAGAATCTAAAGGAAATGATGAAGCCAATGATATGGATA TTGACTTTATTGAAGCCTTAGAACACGCAATGCCACCAACTGCTGGAATTGGTATAGGAATTGATAGATTAGTAATGCTT TTAACTAATTCAGAATCTATTAAAGATGTATTATTATTTCCACAAATGAAGCCAAGAGAATAA Protein sequence : MLDNRKFSEQELVRRNKYKTLVEQNKDPYKVTNWKRNTTLLKLNEKYKDYSKEDLLNLNQELVVVAGRIKLYREAGKKAA FVNIDDQDSSIQLYVRLDEIGDQSFEDFRNFDLGDIIGVKGIMMRTDHGELSIRCKEVVLLSKALRPLPDKHAGIQDIEE KYRRRYVDLIVNHDVRKTFQARTKIIRTLQNFLDNKGYMEVETPILHSLKGGASAKPFITHYNVLNTDVYLRIATELHLK RLIVGGFEGVYEIGRIFRNEGMSTRHNPEFTSIELYVAYEDMFFLMNLTEEIFRVCNAAVNSNSIIEYNNVKIDLSKPFK RLHMVDGIKQVTGVDFWKEMTVQQALELAKKHKVHVEKHQESVGHIINLFYEEFVESTIVEPTFVYGHPKEISPLAKSNP SDPRFTDRFELFILGREYANAFSELNDPIDQYERFKAQIEEESKGNDEANDMDIDFIEALEHAMPPTAGIGIGIDRLVML LTNSESIKDVLLFPQMKPRE |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | CAD66193.1 | putative lysil-tRNA synthetase LysU | Not tested | PAI III 536 | Protein | 4e-100 | 46 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| lysS | YP_007810852.1 | lysine--tRNA ligase | VFG1668 | Protein | 2e-100 | 46 |
