Gene Information

Name : CL3_01630 (CL3_01630)
Accession : YP_007809163.1
Strain : butyrate-producing bacterium SM4/1
Genome accession: NC_021024
Putative virulence/resistance : Virulence
Product : Sugar transferases involved in lipopolysaccharide synthesis
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 149504 - 150082 bp
Length : 579 bp
Strand : -
Note : -

DNA sequence : 
ATGGATATTCTGGGAGCGGCTGTGGGGATTTGCCTGACCGTTTTAATCGGACTCTTCGTCGTTCCGGCCATTAAGCTGGA
GTCTCCTGGACCGGCTGTTTTTAAGCAGACCCGCATTGGGAAAAACGGCCGGAAGTTTTCGATTTATAAGTTTCGTTCCA
TGTATATGGACGCGGAGGAGCGGAAGAAGGAGCTCATGAAGCAGAATGAGATGGATGGGCTCATGTTTAAGATGAAGGAC
GACCCGAGAATTACGAAGGTAGGAAAGTTTATTAGGAAAACGAGTATAGACGAACTTCCGCAGTTTTTTAATGTCCTTCG
GGGAGATATGAGTCTTGTGGGAACGAGACCTCCGACCGTGGACGAGTTTGAGCGCTATGAGGAGCATCACAAAAGGCGCC
TTTCGCTCCGGCCCGGGATTACAGGTATGTGGCAGGTAAGCGGCCGCAGTGACATCCAGAATTTTGAGGATGTGGTGAGG
CTGGATCTGGAGTACATAGACAACTGGTCTGTCTGGCTGGATATCAAGATTCTTTTCCAGACAGTTCTCGTTGTCCTTCT
ACACAGAGGTGCAGAATGA

Protein sequence : 
MDILGAAVGICLTVLIGLFVVPAIKLESPGPAVFKQTRIGKNGRKFSIYKFRSMYMDAEERKKELMKQNEMDGLMFKMKD
DPRITKVGKFIRKTSIDELPQFFNVLRGDMSLVGTRPPTVDEFERYEEHHKRRLSLRPGITGMWQVSGRSDIQNFEDVVR
LDLEYIDNWSVWLDIKILFQTVLVVLLHRGAE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SSP0070 YP_300160.1 capsular polysaccharide synthesis protein Not tested SCC15305cap Protein 4e-24 44
cap1N AAL26667.1 type 8 capsule synthesis gene Virulence SCCcap1 Protein 2e-22 43

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
CL3_01630 YP_007809163.1 Sugar transferases involved in lipopolysaccharide synthesis VFG1309 Protein 8e-25 45