Gene Information

Name : CL3_29170 (CL3_29170)
Accession : YP_007810485.1
Strain : butyrate-producing bacterium SM4/1
Genome accession: NC_021024
Putative virulence/resistance : Virulence
Product : Uncharacterized membrane protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2546701 - 2547450 bp
Length : 750 bp
Strand : -
Note : -

DNA sequence : 
ATGGGAAAGAAGATTTTGCTTGCAGGGGAATCATGGATGAGCTATACCACACATGTGAAGGGATTTGACACCTTTTACAC
ATCTGTCTATGAGACAGGTGAAAAGTATCTGAAGGCGGCTATGGAGAAGGGCGGCTATGAGTTTGTATTCCTTCCGAATC
ATCTGGCTATGGAGGAGTTCCCGTTTACCATGGAGGAGCTGAAGGAATACGATCTGATCATTCTCTCAGACATTGGAGCA
AACACCCTGCTGCTTCCCACAGCTACCTTTACGAGAAGCGAGATGAGGCCTAACCGGTGCAATCTGCTCCGGGACTATGT
GCTGGAAGGAGGAGCCCTTCTGATGGTGGGAGGCTATATGACGTTTTCCGGTGTGGACGGCAAGGGAAAATGGCAGGATA
CGGCGGTACAGGAGGTACTTCCGGTTCAGGTGCTTCCCACAGACGACCGCATGGAGCACTGCGAGGGCGTAAGACCTGTG
ACGGTACAGGATCACCCGGTATTAAAAGGGCTTGACAGGGAGTGGCCGAGAGTTTTAGGATACAATAAGACGATTTTGAA
GCCGGAGGCAGTAGAGGTGGCTTCTGTCTGCGGTGATCCGTTTATCGCCCTTGGCGAATACGGAAAGGGACGGTCTGCAG
CCTTTACAACAGACTGTGCGCCTCACTGGGCTCCGCCGGAATTCTGTGAGTGGAAGGGATACGACATACTGTTCCAGAAT
CTGGCCAGATGGCTGATGCGGGAGGAGTAG

Protein sequence : 
MGKKILLAGESWMSYTTHVKGFDTFYTSVYETGEKYLKAAMEKGGYEFVFLPNHLAMEEFPFTMEELKEYDLIILSDIGA
NTLLLPTATFTRSEMRPNRCNLLRDYVLEGGALLMVGGYMTFSGVDGKGKWQDTAVQEVLPVQVLPTDDRMEHCEGVRPV
TVQDHPVLKGLDREWPRVLGYNKTILKPEAVEVASVCGDPFIALGEYGKGRSAAFTTDCAPHWAPPEFCEWKGYDILFQN
LARWLMREE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
STY1741 NP_456145.1 Orf 245 protein Not tested SPI-2 Protein 1e-47 43
t1249 NP_805053.1 hypothetical protein Not tested SPI-2 Protein 1e-47 43
SC1402 YP_216389.1 hypothetical protein Not tested SPI-2 Protein 1e-47 43
orf245 NP_460346.1 hypothetical protein Not tested SPI-2 Protein 1e-47 43
ORF 245 CAB37418.1 - Not tested SPI-2 Protein 7e-48 43
APECO1_1077 YP_853097.1 hypothetical protein Not tested PAI IV APEC-O1 Protein 5e-44 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
CL3_29170 YP_007810485.1 Uncharacterized membrane protein VFG0482 Protein 4e-48 43