Gene Information

Name : CK5_11720 (CK5_11720)
Accession : YP_007804626.1
Strain : [Ruminococcus] obeum A2-162
Genome accession: NC_021022
Putative virulence/resistance : Resistance
Product : ABC-type antimicrobial peptide transport system, ATPase component
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1161510 - 1162202 bp
Length : 693 bp
Strand : +
Note : -

DNA sequence : 
ATGATTAAAGCGAGAAATATAATAAAATCCTACCAAAACGGAGAAAGCCGATTCCAAGTATTAAAGGACATCAGTCTTGA
TATTGAGGATAATGATTTTGTGGTTATTCTCGGCGCATCTGGTTCTGGCAAGTCAACCTTTTTGAATGTAATTTCAGGTC
TTGAACGCCCTGACAGCGGTAAAGTGTTTTATGACGGAAAGGATATTACAGCACTTTCTGATAATGAATTAACTTCATTT
CGTAAGGAAAATGTCGGATTTATTTTTCAGCAGTATTATTTGCTACCCAATATGAGTGTTGATAAAAATGTAAAAATGGG
TGCTGATTTAGCAAATAATAAAGATTATAAAAACGTCATTAGAGCGGTTGGACTCGGAGAAAAACTACATAAATATCCCA
GCGAACTTTCGGGTGGCGAACAGCAAAGAGTATCTATTGCAAGAGCTTTGGCAAAAAGACCGAGAGTATTATTTCTTGAC
GAACCGACAGGAGCATTAGACGAACAAACAGGACGACAGGTTCTTGATTATATATGTAAACTTCAAAAGGAATATGGTTT
TACGATTGTAATGGTAACGCACAATTTGAATATTGCGGAAATGGCAAACACAGTTATAAAAATGAATAGCGGAAAAATAT
CTGAAATTTACACAAATGAAGCACAAAAGACTGCTTATGAGATAGGGTGGTGA

Protein sequence : 
MIKARNIIKSYQNGESRFQVLKDISLDIEDNDFVVILGASGSGKSTFLNVISGLERPDSGKVFYDGKDITALSDNELTSF
RKENVGFIFQQYYLLPNMSVDKNVKMGADLANNKDYKNVIRAVGLGEKLHKYPSELSGGEQQRVSIARALAKRPRVLFLD
EPTGALDEQTGRQVLDYICKLQKEYGFTIVMVTHNLNIAEMANTVIKMNSGKISEIYTNEAQKTAYEIGW

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 3e-40 44
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 3e-41 41
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 3e-41 41
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 3e-41 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
CK5_11720 YP_007804626.1 ABC-type antimicrobial peptide transport system, ATPase component CP001581.1.gene798.p Protein 2e-42 43
CK5_11720 YP_007804626.1 ABC-type antimicrobial peptide transport system, ATPase component NC_012469.1.7686878. Protein 1e-41 43
CK5_11720 YP_007804626.1 ABC-type antimicrobial peptide transport system, ATPase component NC_012469.1.7685735. Protein 4e-41 42