Gene Information

Name : CK5_10490 (CK5_10490)
Accession : YP_007804518.1
Strain : [Ruminococcus] obeum A2-162
Genome accession: NC_021022
Putative virulence/resistance : Resistance
Product : ABC-type antimicrobial peptide transport system, ATPase component
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1031137 - 1031811 bp
Length : 675 bp
Strand : -
Note : -

DNA sequence :
ATGAGTGTGATATTAGAAACCAGGCAGATTTGTAAGTTTTATGGCGCAGGTGAGAATCAGGTCAAAGCGGTCAATCAGGT
GGACATTCAGATTGAGCAGGGAGAATTTGTCGCAATTGTTGGAAAGTCAGGTTCTGGTAAAAGTACATTACTTCATATGC
TTGGAGGGCTAGACACCCCGACAAAAGGCAGTGTTACTTTAGCAGGGAAAGATTTATACAGGATGAAGGAAGATGCCCTT
GCTGTTTTCCGCAGAAGAAAAATCGGATTTGTTTTTCAGGCATTTAATCTGGTTTCATCTGTTAATGTCTGGGAAAATAT
TGTACTGCCACTTGGGCTGGATGGAAGAAAAGTTGATGAAGCGTATGTAAATGATATTATTGCAACTCTGGGGATTGAAA
ACCGGATTTATAATCTGCCAAATCAGTTATCCGGAGGACAGCAGCAGAGAGTAGCAATTGCAAGAGCACTGGTGAATCGT
CCGGAAATTATATTTGCGGATGAGCCGACAGGCAATCTTGATTCTAAGACCAGTGATGAGGTAATCGCTCTGCTTAAGAT
GACAGCAAAAAAATATGGACAGACAATTGTAATGATTACCCATGATGACGAAATTGCACAGGTCGCTGACCGTATTCTGG
TGATTGAGGACGGACAGGTGGTGGATTTCAGATGA

Protein sequence :
MSVILETRQICKFYGAGENQVKAVNQVDIQIEQGEFVAIVGKSGSGKSTLLHMLGGLDTPTKGSVTLAGKDLYRMKEDAL
AVFRRRKIGFVFQAFNLVSSVNVWENIVLPLGLDGRKVDEAYVNDIIATLGIENRIYNLPNQLSGGQQQRVAIARALVNR
PEIIFADEPTGNLDSKTSDEVIALLKMTAKKYGQTIVMITHDDEIAQVADRILVIEDGQVVDFR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 9e-39 47
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-40 46
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 2e-40 46
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-40 46

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
CK5_10490 YP_007804518.1 ABC-type antimicrobial peptide transport system, ATPase component CP001581.1.gene598.p Protein 5e-67 63
CK5_10490 YP_007804518.1 ABC-type antimicrobial peptide transport system, ATPase component CP001581.1.gene798.p Protein 5e-59 55
CK5_10490 YP_007804518.1 ABC-type antimicrobial peptide transport system, ATPase component NC_012469.1.7686878. Protein 6e-41 46
CK5_10490 YP_007804518.1 ABC-type antimicrobial peptide transport system, ATPase component NC_008702.1.4606598. Protein 5e-34 46