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Name : CK5_04340 (CK5_04340) Accession : YP_007804011.1 Strain : [Ruminococcus] obeum A2-162 Genome accession: NC_021022 Putative virulence/resistance : Unknown Product : Type IV secretory pathway, VirD4 components Function : - COG functional category : - COG ID : - EC number : - Position : 449782 - 451236 bp Length : 1455 bp Strand : + Note : - DNA sequence : ATGAATGGCAGACCAAAGAATCCGAAATTTGCGAGGAACAAGAACGTGATCGTGATTGGCGGATCTGGCTCAGGAAAGAC ACGTTTTTATGTAAAACCCAACTTGATGCAGATGGGAAAATACATCAGTTATGTGGTCACGGACCCGAAAGGGACGATCA TCATTGAGTGCGGAAAGATGCTGGTACGGCATGGATATAAAGTGAAAGTATTGAATACGATCAATTTTTCCAAGAGTATG CATTATAACCCCTTCCACTATATCCATTCGGAAAAGGATATTTTGAAACTGGTAAATACGATCATGGTGAACACGAAAGG GGAAGGCGAGAAGTCCAGTGAGGATTTCTGGACGAAAGCAGAGAGGCTTCTGTACTGTGCCCTGATCGGCTATATCTGGT ATGAAGCACCGGAAGAAGAACAGAACTTTGCGACCCTGCTTGAGTTTATCAACGCTTCGGAAACAAGGGAAGATGATGAG ACATTTAAAAATGCAGTAGATATGCTGTTTGAGGAACTGGAAAAGGAAGAACCGGAGCATTTTGCAGTGCGTCAGTATAA GAAATATAAGCTGGCGGCAGGAAAGACAGCAAAGAGTATTTTGATTTCCTGTGGTGCAAGGCTTGCACCGTTTGACATTG CAGAGCTTCGTGAGATCATGAGCTATGATGAGATGGAACTGGATATGGTAGGTGACCAGAGGACAGCACTGTTTATTATC ATTTCTGATACGGATGATACCTTTAACTTTGTTGTGGCGATGATGTACAGCCAGTTATTCAACCTGTTATGTGACAGAGC GGACGATGTACATCATGGAAGATTGCCATATCATGTCAGAATCCTCTGTGACGAGTTCGCAAATATCGGTCAGATTCCAA AGTTTGACAAGCTGATTGCCACCATTCGTAGCAGGGAAATCTCTGCATCCATTATCCTCCAGTCGCAGTCCCAGTTAAAG ACAATCTACAAAGATGCAGCTGAAACAATCTTAGGCAACTGCGACACGATGTTATTCCTTGGCGGTAAGGAAAGTTCGAC CTTAAAGGAGATTTCCGAGACGCTGGGAAAAGAAACGATTGATTTATATAACACTTCGGACACCCGTGGACAGAGCCGTT CTTACGGGATGAACTATCAAAAAACAGGAAAGGAATTGATGAGCCGGGACGAACTTGCGGTCATGGATGGCAGCAAATGT ATCTTGCAGCTTCGAGGTGTAAGACCATTTTTCAGTGACAAGTTCGATATTACCAAACACAAACGGTATAAGGAGCTGTC AGACTACGATAAGAAAAATGAGTTTGATGTGGAAGCGTATATGCGGCATCGGATGGAAGTGAAACTGACGAGGACACAGG AATTTGACCTGTATGAGTTTTCGGAAGAGAGTCTGGCAGGAGAATTAAATACAGAAAACAAGGAAGCAGAGCATGTGAAA GATTCGGACACATAG Protein sequence : MNGRPKNPKFARNKNVIVIGGSGSGKTRFYVKPNLMQMGKYISYVVTDPKGTIIIECGKMLVRHGYKVKVLNTINFSKSM HYNPFHYIHSEKDILKLVNTIMVNTKGEGEKSSEDFWTKAERLLYCALIGYIWYEAPEEEQNFATLLEFINASETREDDE TFKNAVDMLFEELEKEEPEHFAVRQYKKYKLAAGKTAKSILISCGARLAPFDIAELREIMSYDEMELDMVGDQRTALFII ISDTDDTFNFVVAMMYSQLFNLLCDRADDVHHGRLPYHVRILCDEFANIGQIPKFDKLIATIRSREISASIILQSQSQLK TIYKDAAETILGNCDTMLFLGGKESSTLKEISETLGKETIDLYNTSDTRGQSRSYGMNYQKTGKELMSRDELAVMDGSKC ILQLRGVRPFFSDKFDITKHKRYKELSDYDKKNEFDVEAYMRHRMEVKLTRTQEFDLYEFSEESLAGELNTENKEAEHVK DSDT |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| EFAU085_00690 | YP_008394214.1 | TraG/TraD family protein | Not tested | Not named | Protein | 6e-133 | 70 |
| EF2328 | NP_815983.1 | TraG family protein | Not tested | Not named | Protein | 3e-138 | 70 |
