Gene Information

Name : CK5_04130 (CK5_04130)
Accession : YP_007803997.1
Strain : [Ruminococcus] obeum A2-162
Genome accession: NC_021022
Putative virulence/resistance : Unknown
Product : Site-specific recombinases, DNA invertase Pin homologs
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 427135 - 428820 bp
Length : 1686 bp
Strand : +
Note : -

DNA sequence :
ATGAAGAATAAAAAGATTAAATGCGATATATATACCAGAGTATCCACAACCATGCAGGTGGATGGCTACAGTCTGGATGC
TCAGAAAGAAAAACTCAAGAGATATGCAGAATTTCAGAATATGGAAATCGTAAATGAGTATTCCGATGAAGGTAAGTCTG
GAAAGAGCGTAGAGGGCAGACCGGAATTTCAGAGAATGTTAGATAATATTGAGAATGGAACAGATGAGGTACAGTTTGTA
CTGGTGTTCAAGCTTTCCAGATTCGGTCGTAATGCGGCAGATGTATTAAACTCTTTGCAGAGGATGCAGGATTTTGGAGT
GAATCTGATCTGTGTTGAAGATGGGATTGACAGCTCAAAAGATAGTGGAAAGCTGATGATTTCTGTTCTGTCTGCGGTGG
CAGAGATTGAACGGGAGAATATCCTTGTTCAGACAATGGAAGGACGTAAGCAGAAAGCAAGGGAAGGAAAATGGAACGGC
GGGTTTGCTCCATATGGCTATGAATTGGTAAATGGAGAATTGCAGATCGCAGAGGACGAAGCAGAGATTATTCGTCTGAT
CTATGATAAATTTATTCATACCAATATGGGAATTTCTGCGATTGCTACATGGCTGAACCAGCATGGATATAAAAAGAAAA
AACGACAGAATAATACACTGGACGCATTTGCCGCTTCATTTACAAAAGGCGTTCTGGATAATCCGGTATACTGTGGAAAG
CTGGCTTATGGACGAAGGAAGAACGAGAAAGTATCTGGTACAAGAAATGAATACCGTATTGTAAAGCAGGAAAATTATAT
GCTACACGATGGTATCCATGAAGGAATCATTTCAGAAACAGACTGGGAGCTGGCACATCAAAAACGGGAAAAAACAGGTG
TGAAATATGAAAAGACACATAGTCTCGAGCATGAGCATATTTTATCCGGAATATTGAGATGCCCGTTATGTGGAAGCGGT
ATGTATGGGAATGTGAACCGAAAGAAAAAGAAAGACGGAACTTTATATAAGGATTATTTCTATTATGCCTGCAAACACCG
TCGTCTGGTAGATGGTCATAAATGTGGATATCGTAAACAATGGAGTGAGGAGAAGATTAACAATGCAGTGGAAGAAGTTA
TTCGGAAGCTGGTGAAGAATCCGAAATTTGAAGAAGCAATTCTGAATAAAATCGGTTCAAGAATAGATACAGAAGAAATA
GAAAAAGAGATTGAAAGACTGGAAAAACAGCATAGGCAGTTGACTGGAGCAAAAGGAAGACTTGGACAGCAGATGGACAG
TCTGGATATCATGGATAAATTTTATGAGAAGAAATATCAGGATATGGAGACAAGGTTATACCGTTTGTATGATGAGATTG
AAGGCGTGGAGAACAGTATAGAAGAAGTCAAGAACCGCCTGTTGAATATCCGGCAACAGAAAATATCAGAAGAAAACGTC
TATCAATTTCTTTTATATTTTGATAAACTATATGATAAGTTCACCGACTTGGAGAAGAAAGAATTTCTTAACAGCTTTGT
AGAACAGGTGGACATTTATGAGCAGGAGCAGCCGGATGGCAGATTCCTGAAGCACATAAAGTTCCGTTTCCCGGTGTATT
TTGGAGACAGGGAAACACAGGAACTTTGTTGGGACAAAGAAAGTACCGTTGAGACTGTGGTGGGACTACAAAGGAAAGAT
ACCTAG

Protein sequence :
MKNKKIKCDIYTRVSTTMQVDGYSLDAQKEKLKRYAEFQNMEIVNEYSDEGKSGKSVEGRPEFQRMLDNIENGTDEVQFV
LVFKLSRFGRNAADVLNSLQRMQDFGVNLICVEDGIDSSKDSGKLMISVLSAVAEIERENILVQTMEGRKQKAREGKWNG
GFAPYGYELVNGELQIAEDEAEIIRLIYDKFIHTNMGISAIATWLNQHGYKKKKRQNNTLDAFAASFTKGVLDNPVYCGK
LAYGRRKNEKVSGTRNEYRIVKQENYMLHDGIHEGIISETDWELAHQKREKTGVKYEKTHSLEHEHILSGILRCPLCGSG
MYGNVNRKKKKDGTLYKDYFYYACKHRRLVDGHKCGYRKQWSEEKINNAVEEVIRKLVKNPKFEEAILNKIGSRIDTEEI
EKEIERLEKQHRQLTGAKGRLGQQMDSLDIMDKFYEKKYQDMETRLYRLYDEIEGVENSIEEVKNRLLNIRQQKISEENV
YQFLLYFDKLYDKFTDLEKKEFLNSFVEQVDIYEQEQPDGRFLKHIKFRFPVYFGDRETQELCWDKESTVETVVGLQRKD
T

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SP_1040 NP_345515.1 resolvase family site-specific recombinase Not tested PPI-1 Protein 3e-135 51