Gene Information

Name : CK5_26840 (CK5_26840)
Accession : YP_007805955.1
Strain : [Ruminococcus] obeum A2-162
Genome accession: NC_021022
Putative virulence/resistance : Unknown
Product : Site-specific recombinase XerD
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2719726 - 2720919 bp
Length : 1194 bp
Strand : -
Note : -

DNA sequence :
ATGAAAGAAAAAAGACGGGATAGTAAAGGACGTATCCTGCATACTGGAGAGAGCCAACGAACAGACGGAAAATACTTATA
TAAATATGTGGACGCATTTGGAAACACAAAATATGTGTATGCTTGGAGATTGACACCCACAGACCCGACACCAAAGGGTA
AACGGGAAAAACCCTCACTTCGTGAATTGGAACAGCAGATAAGACGGGATATTGAGGACGGTATCGACAGCACAGGCAAG
AAAATGACGCTTTGCCAACTCTACGCCAAACAGAACGCACAGAGGGCAAACGTGAAGAAAAGCACACAGAAACAACGGGA
ACAGCTCATGCGGTTATTGAAAGAGGATAAGTTAGGTGCTAGGAGCATTGATACGATAAAACCCTCTGACGCTAAAGAAT
GGGCGTTACGCATGAAAGACAAAGGCTTTTCCTATAACACCATTAACAACCATAAACGCTCGTTAAAAGCGTCATTCTAT
ATCGCCATACAAGACGATTGTGTAAGGAAAAACCCTTTTGATTTCAAGTTAAGTGAAGTCCTAGAAAATGATACCAAAGA
GAAAGTCGCATTAACAGAGGAACAGGAACAAGCCTTGTTATCATTCATCAAGACAGACAATGTGTATCACAAATATTATG
ATGATGTGCTGATACTGTTAAAGACAGGACTTCGTATCTCGGAACTGTGCGGACTGACAATCATGGACGTTGATTTTATC
CATGAGGTTGTGGTTATCGACCACCAGTTATTAAAGAGCAAGGAACAGGGCTATTATATTGAAACACCTAAGACAAAAAG
CGGAACAAGGCAAGTGCCATTAAGCAAAGAAACGATACAAGCATTTCAACGAGTTATGAAGAAACGCCCAAAGGCAGAAC
CATTTGTGATAGACGGACGGGGCAACTTTCTATTTGTCAATCATAAAGGCAAGCCTAAAGTTGCGATTGATTACACTATG
CTTTTTGTCCGTATGGTAAAGAAATACAACAAGCACCATAAGGATAACCCCTTGCCACATATCACACCGCACACGCTACG
CCATACGTTCTGTACAAGACTGGCAAACAAGAACATGAACCCGAAAGATTTACAGTATATCATGGGACATTCAAATATCA
GTATCACAATGAACTGGTACGCTCATGCGTCCATAGATACTGCAAAATCAGAGGTTCAGCGTCTAATCGCATAA

Protein sequence :
MKEKRRDSKGRILHTGESQRTDGKYLYKYVDAFGNTKYVYAWRLTPTDPTPKGKREKPSLRELEQQIRRDIEDGIDSTGK
KMTLCQLYAKQNAQRANVKKSTQKQREQLMRLLKEDKLGARSIDTIKPSDAKEWALRMKDKGFSYNTINNHKRSLKASFY
IAIQDDCVRKNPFDFKLSEVLENDTKEKVALTEEQEQALLSFIKTDNVYHKYYDDVLILLKTGLRISELCGLTIMDVDFI
HEVVVIDHQLLKSKEQGYYIETPKTKSGTRQVPLSKETIQAFQRVMKKRPKAEPFVIDGRGNFLFVNHKGKPKVAIDYTM
LFVRMVKKYNKHHKDNPLPHITPHTLRHTFCTRLANKNMNPKDLQYIMGHSNISITMNWYAHASIDTAKSEVQRLIA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SSU05_0917 YP_001198283.1 Tn916, transposase Not tested 89K Protein 1e-125 64
SSU98_0923 YP_001200481.1 Tn916, transposase Not tested 89K Protein 1e-125 64
int YP_008394266.1 integrase Not tested Not named Protein 7e-131 62