Gene Information

Name : CK5_24930 (CK5_24930)
Accession : YP_007805780.1
Strain : [Ruminococcus] obeum A2-162
Genome accession: NC_021022
Putative virulence/resistance : Virulence
Product : Uncharacterized membrane protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2537301 - 2538047 bp
Length : 747 bp
Strand : +
Note : -

DNA sequence : 
ATGCAAAAAAAAGTGCTTTTTGTCGGTGAATCCTGGAGTGCCACATTAATGGAAGTCAAAGGATTCAACAGTTTTTATTC
ATCCAAATATGAAACAGGACTTGGATGGATCGATAAGGCAATCGAAAAAGCAGGATATGAATTTGTGTATATGCCAAATC
ACATTGCAAATGATCAGTTTCCCTTTACATTGGAAGAACTGAATGAATATTCCTGTATCGTTCTGTCAGATGTGGGAGCT
GATACTTTGCTGATTCCTTCTGCTACTTTTGGTGCAAGTAAGATTCTTCCAAACCGCTGTCAGCTGATCAAAGAATATGT
ACTTGGTGGAGGCGGCCTTTTGATGATTGGTGGTTATATGACTTTTAACGGAGTCGGCGGACAGGGGAAATGGTGGGCTA
CACCGGTACAGGATGTCCTTCCGGTACAGCTTCTCCCATATGATGACCGTATGGAACACTGTGAAGGAGTTCGGGCAGAA
GTAACACTTCCTGATCATCCGGTATTTGCCGAAATCGAGGGCGAATGGCCACCGGTACTTGGCTACAATAAGAGTACCAT
TAAGCCGGGTTCAGAACTTGCGGCAACTGTATGCGGTGATCCTTTTATAGCATTCGGAAGTTTCGGAGAAGGCAGATCTG
CAGTTTTTTCCAGTGACTGTTCACCACACTGGGCTCCACCGGAATTCTGTAATTGGAAATATTACGATGTATTATTCAAA
AACATTATTGATTATATTGTAAAATAA

Protein sequence : 
MQKKVLFVGESWSATLMEVKGFNSFYSSKYETGLGWIDKAIEKAGYEFVYMPNHIANDQFPFTLEELNEYSCIVLSDVGA
DTLLIPSATFGASKILPNRCQLIKEYVLGGGGLLMIGGYMTFNGVGGQGKWWATPVQDVLPVQLLPYDDRMEHCEGVRAE
VTLPDHPVFAEIEGEWPPVLGYNKSTIKPGSELAATVCGDPFIAFGSFGEGRSAVFSSDCSPHWAPPEFCNWKYYDVLFK
NIIDYIVK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
APECO1_1077 YP_853097.1 hypothetical protein Not tested PAI IV APEC-O1 Protein 1e-43 44
SC1402 YP_216389.1 hypothetical protein Not tested SPI-2 Protein 2e-40 43
orf245 NP_460346.1 hypothetical protein Not tested SPI-2 Protein 2e-40 43
ORF 245 CAB37418.1 - Not tested SPI-2 Protein 2e-40 43
STY1741 NP_456145.1 Orf 245 protein Not tested SPI-2 Protein 4e-40 43
t1249 NP_805053.1 hypothetical protein Not tested SPI-2 Protein 4e-40 43

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
CK5_24930 YP_007805780.1 Uncharacterized membrane protein VFG0482 Protein 9e-41 43