Gene Information

Name : CK5_22420 (CK5_22420)
Accession : YP_007805570.1
Strain : [Ruminococcus] obeum A2-162
Genome accession: NC_021022
Putative virulence/resistance : Unknown
Product : DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2290542 - 2290964 bp
Length : 423 bp
Strand : -
Note : -

DNA sequence :
ATGGAACCTAATCGCATTGAATGGCAGAAACGCTGCACATTCAACGGCTTTTGCAAAGCGGTATTGAGGAATGAAGCTAT
CGACGCTATCCGAGAAAGAAAGTATCGGAAAAAGCATGAAGTCACTTTTTCAGACCTGTCGCCACAGGAAGAAAATCAGC
TTTACACTTGCGACAAGTATTTTGTAAATGATGAAGCTGAAAAATCTTTCTTTGTCGCTGGGAAAGAAATTACGGCGAAA
CAGCTTGCCGACGCGCTTCACTCTTTGCCGGAAGAAAAGCGTCAAGCTGTACTGTTGTATTACTTCTTTGATATGAAAGA
CGCAGAAATCGCGGAGCTGATGAAGATACCGCGCAGCACAGTACAATTTCGACGGACAAGCTCTTTTGAGCTGTTAAAAA
GATTTTTGGAGGAAAGCCGATGA

Protein sequence :
MEPNRIEWQKRCTFNGFCKAVLRNEAIDAIRERKYRKKHEVTFSDLSPQEENQLYTCDKYFVNDEAEKSFFVAGKEITAK
QLADALHSLPEEKRQAVLLYYFFDMKDAEIAELMKIPRSTVQFRRTSSFELLKRFLEESR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SSU98_0925 YP_001200483.1 hypothetical protein Not tested 89K Protein 3e-12 42
SSU05_0919 YP_001198285.1 hypothetical protein Not tested 89K Protein 3e-12 42