Gene Information

Name : CK5_20150 (CK5_20150)
Accession : YP_007805374.1
Strain : [Ruminococcus] obeum A2-162
Genome accession: NC_021022
Putative virulence/resistance : Virulence
Product : ATP-dependent chaperone ClpB
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2036922 - 2039504 bp
Length : 2583 bp
Strand : +
Note : -

DNA sequence :
ATGAACATCAGTAAGTTTACACAGAAATCCGTGCAGGCTGTTCAGGATCTTGAAAAGGTTGCCTATGAATACGGTAATCA
GGAAGTGGAGCAGGAGCATCTGTTATATGCTCTGCTGACACAGGAAGACAGCCTGATTCTCAAACTGATTGAGAAGATGG
ATATTAATAAAGAATATTTTATCAATGTAGTGAAGAAAGCACTGGATGCAAAAGTCAAAGTATCCGGCGGTGATCTGAGA
TTTGGGCAGTATCTGAACAAATCACTGGTAAATGCGGAAAATGAAGCAAAAGCAATGGGAGACGAATATGTTTCTGTTGA
GCATCTGTTTTTGTCACTGCTGACACAACCAAGCCCGGGTATGAAGAAGATCTTCGATGAATTTGGCATTACCAGAGAAA
GATTTTTGCAGGCGCTGTCTACTGTCAGAGGCAACCAGCGAGTTGTCAGTGACAATCCGGAGGCAACCTATGACACACTG
AATAAATACGGCGAGGATCTTGTGGAGAAAGCAAGAAATCAGAAACTTGATCCGGTCATCGGTCGTGATGCAGAGATTCG
AAACATCGTCCGTATTCTTTCACGTAAGACCAAGAATAATCCGGTTCTGATCGGTGAACCTGGTGTTGGTAAGACAGCAG
CCATTGAAGGTCTGGCACAGCGAATCGTCGCAGGTGATGTCCCGGAAGGCCTGAAAGATAAGAAAATTTTTGCACTGGAC
ATGGGAGCACTGGTTGCAGGTGCGAAATATCGTGGTGAGTTTGAGGAACGTCTGAAAGCAGTTCTTGAAGAGGTAAGAAA
GAGCGAAGGCGAGATCATTCTTTTCATTGATGAGCTGCATCTGATCGTCGGTGCCGGTAAGACAGACGGTGCGATGGATG
CGGGCAACATGCTGAAACCAATGCTTGCCAGAGGTGAACTGCACTGTATAGGTGCAACCACGCTTGACGAGTACCGCCAG
TACATCGAAAAGGATGCCGCACTGGCACGTCGTTTCCAGCCGGTTATGGTAGATGAGCCAACCGTAGAAGATACAATTTC
CATCCTTCGTGGACTGAAAGAGAGATATGAAGTATTCCATGGTGTAAAAATTACAGACAGTGCGCTGGTAGCAGCCGCTA
CGCTTTCACATAGATATATCACAGACAGATTCCTGCCGGACAAAGCCATCGATCTGGTTGATGAAGCATGTGCCCTGATC
AAGACCGAGCTGGATTCCATGCCGACCGAGCTGGATGAACAGAGACGTAAGATCATGCAGCTTGAGATTGAGGAGTCTGC
GCTTAAGAAGGAAACGGACAATCTGAGTAAAGAGCGTCTTGCAGAACTGCAGAAAGAGCTTGCAGAGATGCGTGACACAT
TCAATACGCAGAAAGCACAGTGGGATAATGAGAAACATTCTGTCGAGAAGCTCCAGAAATTACGTGAGCAGATTGAGGAT
ATCAATAAACAGATCCAGAAAGCAAAACAGAATTATGATCTGGAAAAAGCAGCAGAATTGCAGTACGGGGAACTCCCGAA
GCTCCAGCAGCAGCTTGAAATAGAAGAAAAACAGGTTAAAGAAAGCGACCGCAGCCTTGTCCATGAGGCAGTTACAGATG
ATGAGATCGCAAGGATCATTTCACGCTGGACGGGTATCCCGGTAACGAAACTGACCGAGGGTGAGAGAACGAAACTGCTC
GGTCTCGAAGATGAACTGCACAAACGTGTCATCGGTCAGAATGAAGGTGTACGTCTTGTAACAGATGCCATTCTTCGTTC
AAAAGCAGGAATCAAAGATCCGTCCAAACCGATTGGTTCATTCCTGTTCCTCGGACCTACCGGTGTCGGTAAGACAGAAC
TCGCCAAAACACTGGCCGCGACTCTGTTTGATGACGAGCAGAATATGGTACGAATCGATATGAGTGAGTACATGGAGAAA
TATTCTGTATCCCGTCTGATCGGAGCTCCTCCGGGATATGTAGGATATGAAGAAGGCGGTCAGCTTACAGAAGCTGTTCG
TCGTAAACCATACAGTGTTGTATTATTTGATGAGATTGAGAAAGCCCATCCGGATGTATTTAATGTACTTCTGCAGGTGT
TGGATGATGGACGTATCACAGATTCACAGGGCAGAACGGTAGACTTTAAGAACACGATTCTGATCATGACTTCAAACATC
GGTTCACCGTATCTTCTTGATGGTATTGATGAAAAAGGTGAAATAAAACCAGAAGCTCAGGAACAGGTTATGAATGACCT
GCGTGGACACTTCCGGCCGGAATTCCTGAACCGTCTGGATGAAATTATCATGTTCAAGCCATTGACAAAAGAGAATATTG
GCGGCATAGTAGACCTGATGGTCAAAGAACTCAGTGACCGTCTGGCAGATCAGGAACTTTCTCTGGAACTGACAGATGCA
GCCAGAACACAGGTAATTGAAAATGGCTATGATCCGATATATGGTGCAAGGCCTCTGAAACGCTATCTGCAGAATTATGT
GGAAACACTTGTTGCGAAGAAGATTCTTTCCGGCGATGTTCATCAGGGTGACACGCTGGTGCTGGATGTAAAAGACGGAG
AGTTTGTGATCAATACGAAATAA

Protein sequence :
MNISKFTQKSVQAVQDLEKVAYEYGNQEVEQEHLLYALLTQEDSLILKLIEKMDINKEYFINVVKKALDAKVKVSGGDLR
FGQYLNKSLVNAENEAKAMGDEYVSVEHLFLSLLTQPSPGMKKIFDEFGITRERFLQALSTVRGNQRVVSDNPEATYDTL
NKYGEDLVEKARNQKLDPVIGRDAEIRNIVRILSRKTKNNPVLIGEPGVGKTAAIEGLAQRIVAGDVPEGLKDKKIFALD
MGALVAGAKYRGEFEERLKAVLEEVRKSEGEIILFIDELHLIVGAGKTDGAMDAGNMLKPMLARGELHCIGATTLDEYRQ
YIEKDAALARRFQPVMVDEPTVEDTISILRGLKERYEVFHGVKITDSALVAAATLSHRYITDRFLPDKAIDLVDEACALI
KTELDSMPTELDEQRRKIMQLEIEESALKKETDNLSKERLAELQKELAEMRDTFNTQKAQWDNEKHSVEKLQKLREQIED
INKQIQKAKQNYDLEKAAELQYGELPKLQQQLEIEEKQVKESDRSLVHEAVTDDEIARIISRWTGIPVTKLTEGERTKLL
GLEDELHKRVIGQNEGVRLVTDAILRSKAGIKDPSKPIGSFLFLGPTGVGKTELAKTLAATLFDDEQNMVRIDMSEYMEK
YSVSRLIGAPPGYVGYEEGGQLTEAVRRKPYSVVLFDEIEKAHPDVFNVLLQVLDDGRITDSQGRTVDFKNTILIMTSNI
GSPYLLDGIDEKGEIKPEAQEQVMNDLRGHFRPEFLNRLDEIIMFKPLTKENIGGIVDLMVKELSDRLADQELSLELTDA
ARTQVIENGYDPIYGARPLKRYLQNYVETLVAKKILSGDVHQGDTLVLDVKDGEFVINTK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
aec27 YP_851418.1 ATPase Not tested PAI II APEC-O1 Protein 8e-103 42
aec27 AAQ96721.1 Aec27 Not tested AGI-1 Protein 6e-103 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
CK5_20150 YP_007805374.1 ATP-dependent chaperone ClpB VFG0079 Protein 0.0 46
CK5_20150 YP_007805374.1 ATP-dependent chaperone ClpB VFG2076 Protein 3e-119 42
CK5_20150 YP_007805374.1 ATP-dependent chaperone ClpB VFG2084 Protein 1e-109 41