Gene Information

Name : CK5_17300 (CK5_17300)
Accession : YP_007805115.1
Strain : [Ruminococcus] obeum A2-162
Genome accession: NC_021022
Putative virulence/resistance : Unknown
Product : hydroxymethylpyrimidine synthase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1751001 - 1752311 bp
Length : 1311 bp
Strand : -
Note : -

DNA sequence :
ATGACAACTTACACAACACAGATGGATGCAGCCCGCAAAGGGATCGTAACTCCGCAGATCAAAACCGTTGCAGAAAAAGA
ACATATGCCGGTTGAGAAATTGATGGAACTGGTCGCAGAAGGTAAAGTTGCGATCTGTGCCAACAAACACCACACCTGTC
TGAATCCGGAAGGTGTCGGCAGCATGCTCCGCACAAAGATCAACGTAAACCTCGGTGTCTCCAGAGACTGCAAAGACTAT
GATATCGAAATGCAGAAGGTCATGAAAGCCGTTGACCTCGGCGCAGAAGCAATCATGGATCTTTCCAGCCATGGTAATAC
ACAGCCGTTCCGCCAGAAACTTACTCACGAATGTCCTGCCATGATCGGAACCGTTCCGGTATACGACAGCGTCATCCACT
ACCAGCGCGATCTCTCTGAACTGACCGCTCATGATTTCATTGATGTAATTCGTCTCCATGCAGAAGACGGTGTAGATTTC
GTTACACTTCACTGTGGAATTACCAGAAAAACCATCGAGCAGATCAAGAAACACAAACGTAAAATGAACATCGTAAGCCG
TGGCGGAAGCCTTGTCTTTGCATGGATGAGCATGACCGGCGAAGAAAACCCGTTCTATGAATACTTCGATGAGATCCTTG
ATATCTGTGAAGAACACGATGTTACTATCTCACTCGGTGATGCCTGCCGTCCGGGATGTCTGGCTGATGCCACGGATGTC
TGCCAGATTGAAGAACTTGTCCGCCTCGGCGAACTTACCAAACGTGCCTGGGACCACAACGTTCAGGTTATGGTCGAAGG
TCCGGGACATGTACCGCTTGATCAGGTTGCGGCCAATATGAAAGTTCAGCAGACGATCTGCATGGGTGCTCCTTTCTATG
TACTTGGACCTCTTGTTACTGATATTGCTCCTGGTTATGACCATATCACGGCTGCCATCGGTGGTGCCGTTGCAGCCATG
AACGGTGCAGCTTTCCTCTGCTATGTCACACCTGCCGAGCATCTTGCACTTCCGAACGTAGAAGACGTAAAACAGGGCAT
CATTGCTTCAAAAATCGCAGCACACGCTGCCGACATTGCAAAAGGAATCCCACATGCCAGAGACATCGACGACAAAATGG
CAGATGCACGCCGTGTCCTCGACTGGGATGCACAGTTTGCATGTGCGCTCGATCCGGAAACCGCCAAAGCGATCCGTGAT
GACCGTCTGCCGGAAGATGATCACAGCGATACCTGCAGTATGTGTGGTAAATTCTGTGCAGTCCGCAGCATGAACAAAGC
ACTTGCCGGTGAGCACATCGACATCCTTTAA

Protein sequence :
MTTYTTQMDAARKGIVTPQIKTVAEKEHMPVEKLMELVAEGKVAICANKHHTCLNPEGVGSMLRTKINVNLGVSRDCKDY
DIEMQKVMKAVDLGAEAIMDLSSHGNTQPFRQKLTHECPAMIGTVPVYDSVIHYQRDLSELTAHDFIDVIRLHAEDGVDF
VTLHCGITRKTIEQIKKHKRKMNIVSRGGSLVFAWMSMTGEENPFYEYFDEILDICEEHDVTISLGDACRPGCLADATDV
CQIEELVRLGELTKRAWDHNVQVMVEGPGHVPLDQVAANMKVQQTICMGAPFYVLGPLVTDIAPGYDHITAAIGGAVAAM
NGAAFLCYVTPAEHLALPNVEDVKQGIIASKIAAHAADIAKGIPHARDIDDKMADARRVLDWDAQFACALDPETAKAIRD
DRLPEDDHSDTCSMCGKFCAVRSMNKALAGEHIDIL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00317 YP_008207782.1 Thiamine biosynthesis protein ThiC Not tested AbaR25 Protein 3e-70 45
BJAB0868_00321 YP_008211647.1 Thiamine biosynthesis protein ThiC Not tested AbaR26 Protein 3e-70 45