Gene Information

Name : CK5_16910 (CK5_16910)
Accession : YP_007805079.1
Strain : [Ruminococcus] obeum A2-162
Genome accession: NC_021022
Putative virulence/resistance : Resistance
Product : ABC-type antimicrobial peptide transport system, ATPase component
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1708143 - 1708841 bp
Length : 699 bp
Strand : +
Note : -

DNA sequence :
ATGTTTTTGGAAATAAAAGGAATCAAAAAGTCATTTGGTTCAGGTGACAGTAAAGTGGATGTGCTGCGTGGTCTGGATCT
GGACATTGCAAAAGGAGAATTCTGTGTTCTTCTGGGACCGTCCGGTTCCGGTAAGTCCACGCTTTTAAATATTATCGGCG
GAATCGAAAGTGCCGATGATGGCAGCATCTCTATTGAGGGAGAACGACTTGCCGATATGAAAGAAAAGAAATTATCACAG
TACCGAAGAAAGCATCTGGGCTACATTTTTCAGATGTACAACCTGATCCCAAATCTTACTGTGCGTGAAAATATCGAAGT
CGGAGCATATTTAAGTGACCGCCCTCTGGACGTAGATGAACTTCTGCATACACTGGGGCTTTTTGAACATCAGAGAAAAC
TTCCGAACCAGCTGTCCGGAGGCCAGCAGCAGAGGACGGCAATCGGCCGTGCTATCGTAAAGAATCCGGATATCCTGCTC
TGTGATGAACCGACAGGTGCGCTTGATTACAATACATCCAAGGAAATTCTGAAGCTGATCGAAACTATTAATCAGAAATA
TGGAAATACGGTCGTTATGGTTACGCATAATGATGCGATCAAAGATATGGCAGATCGTGTGGTCAAGCTTCGAGACGGTA
TGATCCGTAAGAATTATCAGAATGAACATAAGATTCCTGCGACGGATCTTGAATGGTAA

Protein sequence :
MFLEIKGIKKSFGSGDSKVDVLRGLDLDIAKGEFCVLLGPSGSGKSTLLNIIGGIESADDGSISIEGERLADMKEKKLSQ
YRRKHLGYIFQMYNLIPNLTVRENIEVGAYLSDRPLDVDELLHTLGLFEHQRKLPNQLSGGQQQRTAIGRAIVKNPDILL
CDEPTGALDYNTSKEILKLIETINQKYGNTVVMVTHNDAIKDMADRVVKLRDGMIRKNYQNEHKIPATDLEW

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-42 48
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 2e-42 48
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-42 48
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-40 48

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
CK5_16910 YP_007805079.1 ABC-type antimicrobial peptide transport system, ATPase component CP001581.1.gene798.p Protein 5e-46 45
CK5_16910 YP_007805079.1 ABC-type antimicrobial peptide transport system, ATPase component NC_012469.1.7685735. Protein 2e-48 43
CK5_16910 YP_007805079.1 ABC-type antimicrobial peptide transport system, ATPase component CP001581.1.gene598.p Protein 3e-41 41
CK5_16910 YP_007805079.1 ABC-type antimicrobial peptide transport system, ATPase component NC_012469.1.7686878. Protein 2e-37 41