Gene Information

Name : GPA_14270 (GPA_14270)
Accession : YP_007802427.1
Strain : Gordonibacter pamelaeae 7-10-1-bT
Genome accession: NC_021021
Putative virulence/resistance : Virulence
Product : Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1446306 - 1446986 bp
Length : 681 bp
Strand : +
Note : -

DNA sequence :
ATGAAGATACTCATCATCGAAGACGATCGCGCCATCTCCCGCGCCATCGCCGCGGCGCTGGGCTCGCGTTACGCCTTCGA
CCAGGCGTTCGACGGCGAAGAAGGGCTGTTCTTCGCGCAGCAGAACGTATACGACCTCGTGGTGCTCGACATCATGCTTC
CCGCGCTCGACGGCTACGGCGTGCTGGAGCGGCTGCGCGCCGACGGCATGGACACGCCCGTGCTCATGCTGACGGCGAAG
AACGCCCGCGACGACCGGGTGCGCGGCCTGCAACTGGGCGCCGACGATTACCTGGCGAAGCCGTTCGACCGCGACGAGCT
GGTGCTGCGCGTCGAGGCTATCATCCGGCGCAGCATGGGCGTGCGCACGCTGGACGCCTTCGGGTTCCGCGGCCTGACGC
TCGACCCGAACACGAGGCGCGCTGCCGTCGACGGTGCGCCGGTCGTGCTCAAGGGCAAGCAGTACGACGTTCTTGAGTAC
CTGGTGAGCCACGAGGGGCAGCTCGTGTCCAAAACGCAGCTGTTCGACCGGGTATGGGGGTTCATGAACGACACGTCGTC
GAACGTGGTGGAGGTATACGTGAGCGCGCTGCGCAAGGTGCTGAAGGGGCATGGGTACGACCGCTTCCTCAAGACGATAC
GCGGGGCGGGCTACGTGTGGACGGACGACGATGGGCTTTGA

Protein sequence :
MKILIIEDDRAISRAIAAALGSRYAFDQAFDGEEGLFFAQQNVYDLVVLDIMLPALDGYGVLERLRADGMDTPVLMLTAK
NARDDRVRGLQLGADDYLAKPFDRDELVLRVEAIIRRSMGVRTLDAFGFRGLTLDPNTRRAAVDGAPVVLKGKQYDVLEY
LVSHEGQLVSKTQLFDRVWGFMNDTSSNVVEVYVSALRKVLKGHGYDRFLKTIRGAGYVWTDDDGL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
CDB402_0209 YP_005126722.1 two-component system response regulator Not tested Not named Protein 6e-25 42
mprA YP_005684640.1 response regulator mprA Not tested PiCp 3 Protein 2e-25 41
mprA YP_005680459.1 response regulator mprA Not tested PiCp 3 Protein 2e-25 41
mprA YP_005682550.1 response regulator mprA Not tested PiCp 3 Protein 2e-25 41
tcsR1 YP_003782583.1 two-component system transcriptional regulatory protein Not tested PiCp 3 Protein 2e-25 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
GPA_14270 YP_007802427.1 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain U82965.2.orf14.gene. Protein 1e-24 44
GPA_14270 YP_007802427.1 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain Y16952.3.orf35.gene. Protein 6e-19 42
GPA_14270 YP_007802427.1 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain BAC0197 Protein 2e-30 42
GPA_14270 YP_007802427.1 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain BAC0487 Protein 6e-23 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
GPA_14270 YP_007802427.1 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain VFG1389 Protein 4e-32 42
GPA_14270 YP_007802427.1 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain VFG1386 Protein 2e-30 41