Gene Information

Name : GPA_14240 (GPA_14240)
Accession : YP_007802425.1
Strain : Gordonibacter pamelaeae 7-10-1-bT
Genome accession: NC_021021
Putative virulence/resistance : Resistance
Product : ABC-type antimicrobial peptide transport system, ATPase component
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1444039 - 1444881 bp
Length : 843 bp
Strand : -
Note : -

DNA sequence :
ATGGCCGCAACCGGCAATGCCCGGGCCACGGGCGCGGTACCCTGGAAGGCGCGCAGCACGAGCAGCCCGGTCATACGCAT
GGAGGGGCTGGGCAAGCGCTACCCCATGGGCGAGGGGGAGGTGCGCGCGCTGGAAAACGTCGATTTCGCCGTGCAGGAGG
GCGAATTCGTGGCCATCGTGGGCCCTTCCGGCTCGGGAAAGTCCACCCTCATGAACATCATCGGGCTGCTGGACGTGCCC
GACGACGGAACCTACTGGCTGAACGGGCTCGACGTTGCGGAACTGGCGGACAACGCGCTGGCCGACCTGCGCAACCGCAC
CATCGGGTTCGTGTTCCAGAACTTCAACCTGCTGGGCTCGCTCACGGCGCTGGAGAACGTGAGGCTGCCCTTGTCCTATC
GCGGCACGAGGCCGCGCGAGGCCAACGCCTTCGCCCGCCGTTACCTGGCGAAAGTCGGTCTCGAGGGACGCGAGCGGCAT
CTTCCGCACCAGCTCTCGGGAGGACAGCAGCAGCGCGTGGCCATCGCCCGCGCGCTGGTGGGCAACCCTTCCATCTTGCT
GGCCGACGAGCCCACAGGAGCGCTGGACTCGCGCACGAGCATCGAGATCATGGGGCTGTTCGAGGACTTGCACCGCGAAG
GGCAGACCGTCGTCCTCATCACCCACAACCCGAACTTGGCAGCCCGGGCCGAGCGTACGGCGAGCATCGCCGACGGACGG
CTGCAGGAAGGCAAGGGCTCCGGCTCGAAGACGGCAGCTGACGAGGCCGCGCGTCGGATAACGCTGCAAGCCCGAGGCTT
TGCAGGGGAAGGAGGCCGACGTGCGACGGACGCGATCAGCTAA

Protein sequence :
MAATGNARATGAVPWKARSTSSPVIRMEGLGKRYPMGEGEVRALENVDFAVQEGEFVAIVGPSGSGKSTLMNIIGLLDVP
DDGTYWLNGLDVAELADNALADLRNRTIGFVFQNFNLLGSLTALENVRLPLSYRGTRPREANAFARRYLAKVGLEGRERH
LPHQLSGGQQQRVAIARALVGNPSILLADEPTGALDSRTSIEIMGLFEDLHREGQTVVLITHNPNLAARAERTASIADGR
LQEGKGSGSKTAADEAARRITLQARGFAGEGGRRATDAIS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 3e-34 45
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-34 44
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 2e-34 44
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-34 44
cur_1502 YP_001800896.1 cell division ATP-binding protein FtsE Not tested Not named Protein 8e-35 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
GPA_14240 YP_007802425.1 ABC-type antimicrobial peptide transport system, ATPase component NC_012469.1.7686878. Protein 4e-57 55
GPA_14240 YP_007802425.1 ABC-type antimicrobial peptide transport system, ATPase component NC_008702.1.4606598. Protein 8e-43 47
GPA_14240 YP_007802425.1 ABC-type antimicrobial peptide transport system, ATPase component CP001581.1.gene798.p Protein 7e-43 45
GPA_14240 YP_007802425.1 ABC-type antimicrobial peptide transport system, ATPase component CP001581.1.gene598.p Protein 7e-40 42
GPA_14240 YP_007802425.1 ABC-type antimicrobial peptide transport system, ATPase component NC_012469.1.7685735. Protein 2e-37 42