Gene Information

Name : GPA_07250 (GPA_07250)
Accession : YP_007801972.1
Strain : Gordonibacter pamelaeae 7-10-1-bT
Genome accession: NC_021021
Putative virulence/resistance : Virulence
Product : ATPases with chaperone activity, ATP-binding subunit
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 697900 - 700464 bp
Length : 2565 bp
Strand : -
Note : -

DNA sequence :
ATGTCATTTGAGAAGTTTACGGACAAAGCGCGCAAGGTGCTCGTCCTGGCGCAGGACGAGGCCCGCTCGCTCCATCAGCC
CTACGTGGGCACCGAGCACATCCTGCTCGGCCTCATACAAGAGAAGGACGGCCTGGCCGCCCAAGCCCTCGACCGCAAGG
GCGTGAAGTACGACGCCGTGGTGCAGGCCATCCGCCAGGTGGTCGCCATCGACGAGGACACCGACGTGTCCGGCCACCTG
TCGTTCACCCCGCGCGTCAAGCGCGTGCTGGAGAACAGCCTGCGCGAGGCCATGCAGATGGGCCAATCCTATATCTCCAC
CGAGCACCTGCTGCTCGGCATCGTGCGCGAGGGCGACGGCACGGCGCTCGAGGTGCTCACGCGCCTGGGCGTCTCCGGCG
ACGACATCCGCAGCGCGCTCAACGACCTGGTGGGGCAGAGCCCCGTCTACGCCGGGCGCAACGCGTTCGACCCCCAGGGC
CAAGGCTCCGACAGCGTGCTCAAGGAGTTCGGCACCGACCTCACGCAGAAGGCGCGCGACGGCAAGCTCGACCCGGTCAT
CGGCCGTGCGGGCGAGATCGAGCGCGTCATGCAGGTGCTCAGCCGCCGCCAGAAGAACAACCCGCTGCTCATCGGCGAGC
CGGGCGTGGGCAAGACCGCCGTGGCCGAGGGCCTGGCGCAGCTCATCGTGTCGAACCAGGTGCCGGACATCCTGCGCGAC
AAGCGCCTGTTCACGCTCGACGTGAGCGCGCTCGTGGCCGGGTCCAAGTACCGCGGCGAGTTCGAGGAGCGTCTGAAGAA
GTGCATCAAGGAGGTCATGGACGCGGGCGACATCATCCTGTTCATCGACGAGATGCACACGCTCATCGGCGCGGGCTCGG
CCGAGGGTTCCATCGATGCCGCCGCCATCCTGAAGCCGCCGCTGTCCCGCGGCGAGATCCAGGTGATCGGCGCCACCACC
ATCGACGAGTACCGCAAGCACCTTGAGAAGGACTCCGCGCTTGAGCGCCGCTTCCAGCCCATCACCGTGGGCGAGCCGAA
CGAGGAGCAGGCGCTGCGCATCATGGAGGGCCTGCGCGACCGCTACGAGGCGCATCACCAGGTGCACTTCACCGACGAGG
CGCTGCAGGCGGCCGTGACGCTGGCCGACCGCTACATCCAGGACCGCTTCCTGCCCGACAAGGCCATCGACGTGCTCGAC
GAGGCCGGCGCCCGCATGCGCATCCGCAACATGACGCTGCCGAAGGAGCTGCGCGACCTGGACGAGGAGCTGCGCAAGCT
CCGCGCCGAGAAGGACGGCGCCATCGCCGCCCAGGACTTCGAGCGCGCCGCCCAGCTGCGCGACGAGGAGGCCCAGCTCA
AGGACAAGCGCGTCCAGGCCGAGAAGGACTGGGAGGAGAACGCCCAGAAGACCATCCAGCAGGTGACGGTGGAGGATATC
GCCGACGTGGTGTCCATGACCACCGGCGTGCCGGTGTCCAACCTCACCGAGGCCGAGACCGAGAAGCTGCTGCGCATGGA
GAGCGTGCTGCACGAGCGCGTCGTGGGCCAGGAAGAGGCCGTGACGGCGCTTTCGAAGGCCATCCGCCGCTCGCGCTCGG
GCCTCAAGGACCCGAAGCGCCCCGCCGGCTCGTTCATCTTCCTGGGCCCCTCGGGCGTGGGCAAGACGGAGCTGTCCAAG
GCGCTGGCCGAGTTCCTGTTCAACTCCGAGGACGCGCTCCTGTCCTTCGACATGTCCGAGTACATGGAGAAGCATAGCGT
GAGCCGCCTGGTGGGCAGCCCTCCGGGCTACGTGGGCTTCGACGAGGGCGGCCAGCTGACGAAGGCCGTGCGCCAGCGCC
CCTACTCGGTGGTGCTGTTCGACGAGATCGAGAAGGCGCACCCCGACGTGTTCAACATCCTGCTCCAGATTTTGGAGGAG
GGCCGCTTGACGGACGCGCAGGGCCGCACGGTTGACTTCCGCAACACGGTCATCATCATGACGTCGAACGTGGGCGCGCG
CGAGATCGCGCAGCCGACGACGCTCGGCTTCTCCACCGAGGAGCACGCGGGCCTCTCCGACAAGGAGATCAAGAGCCGCG
TCATGTCCGAGATGAAGAAGCTGTTCCGTCCCGAGTTCCTGAACCGCATCGACGAGATCATCGTGTTCAAGAGCCTGAAC
GACGAGCAGATCGCCGAGATCGTGAAGCTCATGGTGGCCGATTTGCGCGAGCGCCTTATCGCGCAGAACATGTCCATCAA
CCTGACCGACACGGCGTGCAAGCTCATCGCCAAGGAGGGCACCGACGCCACGTTCGGCGCGCGCCCGCTGCGCCGTGCCA
TCCAGCGCTTGCTGGAGGACCCGCTGTCCGAGGAGATCCTCGAGGGCAAGTGGTCCACGGGGTCGATCATCGATGTGGAC
GCGGTGGACGGCGAGCTCGTGTTCACCCAGGGCTCGGGCGTTGTCCCGGAGCCGCGGAAGCGCGACAGCATCGCGCGGGA
CGCCGAGCTCTTGCTGACGAACTACGACCTGGGCCACGCCGGCGTGCGCGGCGGCGGGTCGATGTCGGGCGGCGCGGCGG
ACTAG

Protein sequence :
MSFEKFTDKARKVLVLAQDEARSLHQPYVGTEHILLGLIQEKDGLAAQALDRKGVKYDAVVQAIRQVVAIDEDTDVSGHL
SFTPRVKRVLENSLREAMQMGQSYISTEHLLLGIVREGDGTALEVLTRLGVSGDDIRSALNDLVGQSPVYAGRNAFDPQG
QGSDSVLKEFGTDLTQKARDGKLDPVIGRAGEIERVMQVLSRRQKNNPLLIGEPGVGKTAVAEGLAQLIVSNQVPDILRD
KRLFTLDVSALVAGSKYRGEFEERLKKCIKEVMDAGDIILFIDEMHTLIGAGSAEGSIDAAAILKPPLSRGEIQVIGATT
IDEYRKHLEKDSALERRFQPITVGEPNEEQALRIMEGLRDRYEAHHQVHFTDEALQAAVTLADRYIQDRFLPDKAIDVLD
EAGARMRIRNMTLPKELRDLDEELRKLRAEKDGAIAAQDFERAAQLRDEEAQLKDKRVQAEKDWEENAQKTIQQVTVEDI
ADVVSMTTGVPVSNLTEAETEKLLRMESVLHERVVGQEEAVTALSKAIRRSRSGLKDPKRPAGSFIFLGPSGVGKTELSK
ALAEFLFNSEDALLSFDMSEYMEKHSVSRLVGSPPGYVGFDEGGQLTKAVRQRPYSVVLFDEIEKAHPDVFNILLQILEE
GRLTDAQGRTVDFRNTVIIMTSNVGAREIAQPTTLGFSTEEHAGLSDKEIKSRVMSEMKKLFRPEFLNRIDEIIVFKSLN
DEQIAEIVKLMVADLRERLIAQNMSINLTDTACKLIAKEGTDATFGARPLRRAIQRLLEDPLSEEILEGKWSTGSIIDVD
AVDGELVFTQGSGVVPEPRKRDSIARDAELLLTNYDLGHAGVRGGGSMSGGAAD

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
clpC YP_005163377.1 ATP-dependent Clp protease ATP-binding subunit Not tested Not named Protein 0.0 56

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
GPA_07250 YP_007801972.1 ATPases with chaperone activity, ATP-binding subunit VFG0079 Protein 0.0 56
GPA_07250 YP_007801972.1 ATPases with chaperone activity, ATP-binding subunit VFG0080 Protein 2e-155 51