Gene Information

Name : GPA_04670 (GPA_04670)
Accession : YP_007801852.1
Strain : Gordonibacter pamelaeae 7-10-1-bT
Genome accession: NC_021021
Putative virulence/resistance : Resistance
Product : ABC-type antimicrobial peptide transport system, ATPase component
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 463669 - 464349 bp
Length : 681 bp
Strand : +
Note : -

DNA sequence :
ATGGATATCCTCTCTGCGGAGCGGCTGACGAAGGTGTACGGGCAGGGGCCGACGGCGCTCAAGGCGCTCGACAGCGTGAC
GCTGTCCATCGGGCAGGGCGAGTTCGTGGCCATCGTGGGCTCGTCGGGCTCCGGCAAGTCGACGCTTCTGCACCTCATGG
GCGGCGTGGACCGCCCCACATCGGGCACCGTGCGCCTGGCCGGCGCGGACGTGTACGCGCGCACCGACGAGGAGCTTGCG
GTGCTGCGCCGGCGCGAGGTGGGGCTGGTCTACCAGTTCTACAACCTCATCCCCGTGCTCAACGTGGTGGAGAACATGAC
GCTGCCCGTGCTCATGGACGGCCGGCCGGTGAACGAGGAGCGCCTGGGCACGCTGCTCGACGGCCTGGGGCTGCGCGGCC
ACGAGGGATTCCTGCCCAACCAGCTCTCCGGCGGCCAGCAGCAGCGCGTGGCCATCGGGCGCGCCCTCATGAACGCGCCC
GCCGTGGTGCTGGCCGACGAGCCCACCGGCAACCTCGACTCGCGGAACTCCCGCGAGATCATGGGCCTTCTGCGCGACTC
GAACCGCCACTTCGACCAGACGCTCGTCGTGATCACGCACGACGAGGACATAGCCTGCGCGGCCGACCGCGTCATCGCCA
TCGAGGACGGGCGCGTCGCCTCGGACGAGAGGCGGCGCTAG

Protein sequence :
MDILSAERLTKVYGQGPTALKALDSVTLSIGQGEFVAIVGSSGSGKSTLLHLMGGVDRPTSGTVRLAGADVYARTDEELA
VLRRREVGLVYQFYNLIPVLNVVENMTLPVLMDGRPVNEERLGTLLDGLGLRGHEGFLPNQLSGGQQQRVAIGRALMNAP
AVVLADEPTGNLDSRNSREIMGLLRDSNRHFDQTLVVITHDEDIACAADRVIAIEDGRVASDERRR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 9e-31 44
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 4e-32 43
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 4e-32 43
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 4e-32 43
cur_1502 YP_001800896.1 cell division ATP-binding protein FtsE Not tested Not named Protein 2e-24 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
GPA_04670 YP_007801852.1 ABC-type antimicrobial peptide transport system, ATPase component CP001581.1.gene598.p Protein 2e-52 53
GPA_04670 YP_007801852.1 ABC-type antimicrobial peptide transport system, ATPase component CP001581.1.gene798.p Protein 2e-48 49
GPA_04670 YP_007801852.1 ABC-type antimicrobial peptide transport system, ATPase component NC_008702.1.4606598. Protein 1e-28 42
GPA_04670 YP_007801852.1 ABC-type antimicrobial peptide transport system, ATPase component NC_012469.1.7686878. Protein 2e-33 41