Gene Information

Name : GPA_35010 (GPA_35010)
Accession : YP_007803598.1
Strain : Gordonibacter pamelaeae 7-10-1-bT
Genome accession: NC_021021
Putative virulence/resistance : Unknown
Product : Type I restriction-modification system methyltransferase subunit
Function : -
COG functional category : -
COG ID : -
EC number : 2.1.1.72
Position : 3540334 - 3541914 bp
Length : 1581 bp
Strand : +
Note : -

DNA sequence :
ATGGCCAATACCACTAAGGAGCAACAGAGGGCGGAACTGCATAAGACAATTTGGTCCATTGCAGATGACCTGCGCGGCAG
CGTTGATGGCTGGGACTTCAAGCAGTACATCCTCTGCACGCTGTTCTATCGTTTTGTCAGCGAGAACCTTTGCACCTATC
TTGCCGAGCAAGAGGGCGATGCTTCTTTTGACTATGCCTCCATGTCTGATGATCAGGCCGAATGGGGCCGCGGGGAGACT
GTCAAGGAGAAGGGCTTCTTCATCCTTCCGAGCGAGCTCTTTTGCAACATCCTCAAGCACGTTGACAAGGATGGCATGCG
CTTGACGGAGGATGGGCAGGACCTCAATGAGCTGCTTTCCCAGACATTTAAGAATATCGAGGGCTCTGCCGTTGGCACGG
AATCTGAGGGCGACCTCAAGGGTCTTTTCGACGATATGGACGTCAACAGTGCCAAGCTTGGCAACTCCGTCATCGAGCGT
AACAAGAAGCTCGTTAAGCTAATTTCAAAGATTGGTTCGCTAGATTTTGGCGGAGCATTCCAAGACAACTCCATCGACGC
CTTTGGCGATGCGTACGAGTACCTCATGACTATGTATGCCTCCAACGCCGGCAAGTCCGGTGGCGAGTTCTTCACCCCGC
AGGAGGTGGGCGAGCTTTTGGCGCGTATCGCCATCGGCGATCGCAAGAGCGTGAATAAGGTGTACGATCCTTGCTGCGGC
AGCGGTGGACTGCTTCTTAAGTTTGCAAAGATCCTGGGTAAGGAAAACGTGCGCAACGGCTATTTTGGCCAGGAGATCAA
CCTGACCACATACAACCTGGCGCGTATCAACATGTTTCTGCACGATGTGAACTTCGATAAGTTCGATATCGCGTTGGGCG
ATACCCTCAAGGAACCTGCCCATTGGGACGATGAGCCGTTCGATGCCATCGTTTCGAATCCCCCATATTCGATTAAGTGG
GAAGGCAAGGCCAATCCGCTTAACATCAATGACGCACGCTTTAGCCCCGCAGGCGTCTTGGCGCCTGCTAGCAAGGCGGA
CCTTGCCTTCACGATGCATATGTTGAGTTGGCTTTCCACTGAGGGCACGGCTGCCATCGTCGAGTTTCCCGGCGTGCTCT
ACCGTGGAGGTGCCGAGGGCAAGATTCGCGACTATCTGGTGCGCAACAACTTCGTTGAGGCGGTTATTCAGCTTCCTGCT
GACCTGTTCTTCGGTACCACCATCGCCACCTGCATCATCGTGCTCAAGAAGAACAAGACCGCAAGCGATGTGCTGTTCAT
CGATGCGAGCGAGCAATTTGAGCGCCGTGATTCCAAGAACAAGCTGATGCCGGCGAACATCGAGCGCATCATGGCTGCCG
TCAGCTCGCGCGAGGAAGAGGAGCATTTCGCCAGGTGCGTCGCCAATGACGAGGTCTTGGCAAATGATGCGAACCTGTCC
GTCAGCTCGTATGTCGAGAAGAAGGATGAGCGCGAGGAAATCGATATTGCCGAGCTCAACGCCGAGATCACCCGCATCGT
TGCGCGCGAGGACGAGCTGCGCCGCAAGATCGACGCCATCGTCGCAGATTTGGAGGCCTAG

Protein sequence :
MANTTKEQQRAELHKTIWSIADDLRGSVDGWDFKQYILCTLFYRFVSENLCTYLAEQEGDASFDYASMSDDQAEWGRGET
VKEKGFFILPSELFCNILKHVDKDGMRLTEDGQDLNELLSQTFKNIEGSAVGTESEGDLKGLFDDMDVNSAKLGNSVIER
NKKLVKLISKIGSLDFGGAFQDNSIDAFGDAYEYLMTMYASNAGKSGGEFFTPQEVGELLARIAIGDRKSVNKVYDPCCG
SGGLLLKFAKILGKENVRNGYFGQEINLTTYNLARINMFLHDVNFDKFDIALGDTLKEPAHWDDEPFDAIVSNPPYSIKW
EGKANPLNINDARFSPAGVLAPASKADLAFTMHMLSWLSTEGTAAIVEFPGVLYRGGAEGKIRDYLVRNNFVEAVIQLPA
DLFFGTTIATCIIVLKKNKTASDVLFIDASEQFERRDSKNKLMPANIERIMAAVSSREEEEHFARCVANDEVLANDANLS
VSSYVEKKDEREEIDIAELNAEITRIVAREDELRRKIDAIVADLEA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
hsdM NP_645209.1 type I site-specific deoxyribonuclease LldI chain hsdM Not tested vSa¥á Protein 1e-97 43
SSP0053 YP_300143.1 type I restriction-modification system methyltransferase subunit Not tested SCC15305cap Protein 2e-98 43
SAS0394 YP_042520.1 restriction enzyme modification protein Not tested vSa¥á Protein 1e-97 43
hsdM YP_001331432.1 type I restriction-modification system, methyltransferase subunit Not tested vSa¥á Protein 8e-98 42
SAMSHR1132_03780 YP_005324900.1 putative type I restriction enzyme modification protein Not tested vSa¥á Protein 1e-97 42
hsdM NP_370955.1 type I site-specific deoxyribonuclease LldI chain Not tested vSa¥á Protein 8e-97 42
hsdM YP_493119.1 type I restriction-modification system, M subunit Not tested vSa¥á Protein 8e-98 42
SAMSHR1132_16570 YP_005326167.1 restriction-modification system, M subunit Not tested vSa¥â Protein 3e-97 42
hsdM2 YP_186690.1 type I restriction-modification system, M subunit Not tested vSa¥â Protein 7e-98 42
SAR0433 YP_039884.1 type I restriction enzyme modification protein Not tested vSa¥á Protein 1e-97 42
SAS1732 YP_043848.1 type I restriction enzyme modification protein Not tested vSa¥â Protein 2e-97 42
hsdM NP_646568.1 hypothetical protein Not tested vSa¥â Protein 2e-97 42
ORF6 BAC22943.1 - Not tested etd PI Protein 2e-97 42
SAV1808 NP_372332.1 type I restriction enzyme EcoR124II M protein Not tested vSa¥â Protein 2e-97 42
SA1626 NP_374915.1 hypothetical protein Not tested vSa¥â Protein 2e-97 42
SAKOR_00415 YP_008490599.1 Type I restriction-modification system methylation subunit Not tested vSa¥á Protein 1e-97 42
hsdM NP_373642.1 type I site-specific deoxyribonuclease LldI subunit HsdM Not tested vSa¥á Protein 2e-97 42
hsdM1 YP_185366.1 type I restriction-modification system, M subunit Not tested vSa¥á Protein 8e-98 42
SAR1899 YP_041281.1 type I restriction modification system modification protein Not tested vSa¥â Protein 2e-95 42
hsdM YP_001332734.1 type I restriction-modification system, methyltransferase subunit Not tested vSa¥â Protein 1e-97 42
hsdM YP_494443.1 type I restriction-modification system, M subunit Not tested vSa¥â Protein 1e-97 42
SAKOR_01757 YP_008491945.1 Type I restriction-modification system methylation subunit Not tested vSa¥â Protein 1e-97 42