Gene Information

Name : GPA_02080 (GPA_02080)
Accession : YP_007801727.1
Strain : Gordonibacter pamelaeae 7-10-1-bT
Genome accession: NC_021021
Putative virulence/resistance : Virulence
Product : aldehyde dehydrogenase (acceptor)
Function : -
COG functional category : -
COG ID : -
EC number : 1.2.99.3
Position : 208862 - 210346 bp
Length : 1485 bp
Strand : -
Note : -

DNA sequence :
ATGGAGAACCCCGCACAGAAATCCTACCAGCTCTACATCGACGGCCAGTGGGTCGACGCGTCGGACGGGGGCACGCTCGA
CGTGTTCTGCCCGGCCAACGGCGAGCAGCTGTCCACCATCGCCGACGCCACCAAAGAAGACGTCGACCGCGCGGTCGATG
CGGCGTGGAAGGCGTTCGAGACCTGGGGCAAGACCGACAAGGCCGAACGCGCCATCATCCTGAACAAGGTTGCCGACATC
ATCGAGGCCAACGCCGAGAAGCTGGCGCTGCTCGAGTCGCTCGACAACGGCAAGCCCATCCGCGAGACGCGCGCCATCGA
CGTGGCGTACTCCGTCGACCACTTCCGCTACTTCGCCGGCGTGCTTCTGGCCGACACGGGCGAGGCCGATATGCTGCCCG
GCAACATGATGTCGCTCGTGCTGCACGAGCCCATCGGCGTGGTGGGGCAGATCGTGCCGTGGAACTTCCCGTTCCTCATG
GCCGCCTGGAAGCTGGCCCCGGTGCTGGCCGCCGGCGACTGCACCGTGTTCAAGCCCTCGTCCACCACCTCGCTCACAGT
GCTGGAGCTGGCCAAGCTCACCCAGGACGTCATCCCGGCCGGCGTGTTCAACGTGGTCACGGGCCGCGGCAGCAAGTCGG
GCCAGTACATCCTCGACAACCCCAAGATCAGCAAGCTCGCGTTCACCGGATCGACCGAGGTGGGCCGCGACGTGGCCCGC
GCGGCGGCCGAGCGCCTCATCCCGGCTACGCTGGAGCTGGGCGGCAAGTCCGCGAACATCATCTTCCCCGACTGCAAGTG
GGACATGATGCTGGACGGCATCCAGCTGGGCATATTGTTCAACCAGGGCCAGGTGTGCTGCGCCGGCAGCCGCATCTTCG
TGCACGAGGACATCTACGACAAGTTCGTCGAGGACGCCTGCCGCGCGTTCGGCAACGTGAAGATCGGCATGCCGTGGGAG
GACGACACCCAGATGGGCAGCCAGATCGACCAAGGCCAGATGAACAAGATCCTCGAGTACGTGGAGATCGCCAAGCAGGA
GGGCGGCCGCGTCCTCTGCGGCGGCGAGCGCGCCACCGAGGGCGACCTGGCCCGCGGCGCGTTCCTCAAGCCGACGCTCA
TCGAGGTGCCGAGCAACTCGTGCCGCGTGGCGCAGGAGGAGATCTTCGGGCCCGTGGCCGTGGTCATCAAGTTCAAGGAC
GAGCAGGAGGTCATCGATATGGCCAACGACTCGGTCTACGGCCTGGGCGGCGCCGTGTGGACCCGCGACATCAACCGCGC
GTTCCGCGTGGCGCAAGGCGTGCGCACCGGCCGCATGTGGGTGAACACCTACAACCAGATCCCCTCGGGCGCGCCGTTCG
GCGGCTACAAGGAGTCCGGCATCGGCCGCGAGACGCACAAGATCATGCTCGAGCACTACACCCAGACGAAGAACATCATG
ATCAACCTCGGCGAGGAGCCGAGCGGCTTCTATCCCGAGAAGTAG

Protein sequence :
MENPAQKSYQLYIDGQWVDASDGGTLDVFCPANGEQLSTIADATKEDVDRAVDAAWKAFETWGKTDKAERAIILNKVADI
IEANAEKLALLESLDNGKPIRETRAIDVAYSVDHFRYFAGVLLADTGEADMLPGNMMSLVLHEPIGVVGQIVPWNFPFLM
AAWKLAPVLAAGDCTVFKPSSTTSLTVLELAKLTQDVIPAGVFNVVTGRGSKSGQYILDNPKISKLAFTGSTEVGRDVAR
AAAERLIPATLELGGKSANIIFPDCKWDMMLDGIQLGILFNQGQVCCAGSRIFVHEDIYDKFVEDACRAFGNVKIGMPWE
DDTQMGSQIDQGQMNKILEYVEIAKQEGGRVLCGGERATEGDLARGAFLKPTLIEVPSNSCRVAQEEIFGPVAVVIKFKD
EQEVIDMANDSVYGLGGAVWTRDINRAFRVAQGVRTGRMWVNTYNQIPSGAPFGGYKESGIGRETHKIMLEHYTQTKNIM
INLGEEPSGFYPEK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
VC0819 NP_230467.2 aldehyde dehydrogenase Not tested VPI-1 Protein 7e-102 50
aldA AAC12273.1 aldehyde dehydrogenase Virulence VPI Protein 7e-106 49
aldA AAK20747.1 aldehyde dehydrogenase Virulence VPI Protein 7e-106 49
aldA AAK20776.1 aldehyde dehydrogenase Virulence VPI Protein 7e-106 49
aldA-1 YP_001216300.1 aldehyde dehydrogenase Not tested VPI-1 Protein 1e-105 49

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
GPA_02080 YP_007801727.1 aldehyde dehydrogenase (acceptor) VFG0082 Protein 3e-102 50