Gene Information

Name : GPA_17490 (GPA_17490)
Accession : YP_007802613.1
Strain : Gordonibacter pamelaeae 7-10-1-bT
Genome accession: NC_021021
Putative virulence/resistance : Virulence
Product : nucleotide sugar dehydrogenase
Function : -
COG functional category : -
COG ID : -
EC number : 1.1.1.22
Position : 1758710 - 1759918 bp
Length : 1209 bp
Strand : +
Note : -

DNA sequence :
ATGAGGATAGCGGTCGCGGGCACCGGGTACGTGGGGCTGTCGCTGGCGGTGCTGCTGGCGCGGGGGAGCGAGGTCGTGGC
GGTGGACGTCGTCCCCGCGAAGGTCGAGGCGCTCGCCAGGTGGGAGAGCCCCATACGGGACGCCGAGATCGAGGAGGCGC
TCGCCGGGGCCGCCTCGGGGGAGCGCCCGCTCGCGCTCTCGGCGACGCTGGACGCGGGGGAGGGGTATAGAAACATCGAC
TTCGCCGTCGTGGCGACCCCCACCGACTACGACCCGGCGCGCAACTTCTTCAACACCTCGAGCGTGGAGGCGGCCGTGGC
CGCCATCCGCGCGGCGAGCCCCGAGGCGTGGATCGTCGTGAAGTCCACCGTCCCCGTCGGCTACACCGCGCAGCTGCGCG
AGCGCCTGGGCGATCGTCGCATCCTCTTCAGCCCCGAGTTCCTGCGCGAGGGGAGGGCCCTCCACGACAACCTCCACCCC
TCCCGCATCATCGTGGGCGCCGACGAGTCCGACCCGGAGTCCATGGAGGCAGCCCGGCGCTTCGCGAACCTGCTCGCCGA
GGGCGCGGAGGACGAGGCCCCCGTGCTCGTCATGGGCTCCACCGAGGCCGAGGCCGTGAAGCTCTTCGCCAACACGTTCC
TCGCGCTGCGCGTCGCCTACTTCAACGAGCTCGACACCTACGCGAGCTCCCGGGGCCTGGACGCCGCGCGCGTCATCGAG
GGCGTGTGCCTGGACCCCCGCGTGGGCTCCCACTACAACAACCCCTCCTTCGGCTACGGCGGCTACTGCCTGCCCAAGGA
CACCAAGCAGCTGCTCGCGAACTACGCCGACGTGCCGCAGAACGTCATGGGCGCGGTCGTGGATGCGAACCGCACCCGCA
AGGACTTCGTGGCCGACCAGGTGCTCGAGCGGGCCTCGGCGCTGGAGGAGCCGCTCGTCGGCGTCTACCGCCTCACCATG
AAGACGGGCTCGGACAACTTCCGCGCCTCGTCCGTGCAGGGCGTCATGAAGCGCGTCAAGGCCAAGGGCGTGCCCGTCCT
CGTCTACGAGCCCACCCTGAGCGCTCCCGAGTTCTTCGGCAGCGAGGTCACCCACGACCTCGAGTCCTTCAAGGAGCGCG
CGGGCGTGATCGTCGCCAACCGCTGGAGCGACGAGCTCGCCGACGTGGTGGGGAAGGTGTACACGCGGGATCTGTTTAAA
AGAGACTAA

Protein sequence :
MRIAVAGTGYVGLSLAVLLARGSEVVAVDVVPAKVEALARWESPIRDAEIEEALAGAASGERPLALSATLDAGEGYRNID
FAVVATPTDYDPARNFFNTSSVEAAVAAIRAASPEAWIVVKSTVPVGYTAQLRERLGDRRILFSPEFLREGRALHDNLHP
SRIIVGADESDPESMEAARRFANLLAEGAEDEAPVLVMGSTEAEAVKLFANTFLALRVAYFNELDTYASSRGLDAARVIE
GVCLDPRVGSHYNNPSFGYGGYCLPKDTKQLLANYADVPQNVMGAVVDANRTRKDFVADQVLERASALEEPLVGVYRLTM
KTGSDNFRASSVQGVMKRVKAKGVPVLVYEPTLSAPEFFGSEVTHDLESFKERAGVIVANRWSDELADVVGKVYTRDLFK
RD

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SSP0068 YP_300158.1 UDP-glucose 6-dehydrogenase Not tested SCC15305cap Protein 3e-77 50

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
GPA_17490 YP_007802613.1 nucleotide sugar dehydrogenase VFG0963 Protein 3e-89 50