Gene Information

Name : FPR_28840 (FPR_28840)
Accession : YP_007801372.1
Strain : Faecalibacterium prausnitzii SL3/3
Genome accession: NC_021020
Putative virulence/resistance : Virulence
Product : Sugar transferases involved in lipopolysaccharide synthesis
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2908220 - 2908828 bp
Length : 609 bp
Strand : +
Note : -

DNA sequence : 
ATGTATCGGAATCGGATCAAACGGCTGCTGGATATTTTGCTGTCGGCCTGCGGCATTCTGTGCCTTTCGTGGCTGCTGCT
GCTTTTGGCTGTTGCCATCAAGCTGGACTCGCCCGGGCCGGTGTTTTTCCGGCAGAAGCGTGTGGGCATCGGCAAGCGGC
ATTTCCAGATCCTCAAGTTCCGCACTATGCGCATTGATACCCCGCACGATATGCCCACCCATCTGCTGCACGACCCGGAG
CAGTATATCACCCGCATGGGGCACTTTCTGCGCAAGACCAGTCTGGACGAGCTGCCCCAGCTGTGGAATATCCTTGTGGG
GGATATGGCGGTCATCGGCCCGCGCCCGGCGCTGTGGAACCAGTACGACCTGCTGGCCGAACGGGATAAGTACGGTGCAA
ACGATGTGCGCCCCGGGTTGACCGGCTGGGCGCAGATCCATGGCCGGGACGAGCTGGAAATTACCGAAAAGGCAAAGCTG
GACGGCTGGTATGTGGAGCACATCAGCTTTGGGCTGGATGTGAAGTGCTTCTTTGGCACTATTACCGCCGTGCTCAAGCA
TGACGGCGTGGTGGAGGGCGGCACCGGCACCCTGCATGATGAAAAATGA

Protein sequence : 
MYRNRIKRLLDILLSACGILCLSWLLLLLAVAIKLDSPGPVFFRQKRVGIGKRHFQILKFRTMRIDTPHDMPTHLLHDPE
QYITRMGHFLRKTSLDELPQLWNILVGDMAVIGPRPALWNQYDLLAERDKYGANDVRPGLTGWAQIHGRDELEITEKAKL
DGWYVEHISFGLDVKCFFGTITAVLKHDGVVEGGTGTLHDEK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
cap1N AAL26667.1 type 8 capsule synthesis gene Virulence SCCcap1 Protein 1e-37 50
SSP0070 YP_300160.1 capsular polysaccharide synthesis protein Not tested SCC15305cap Protein 5e-37 49

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
FPR_28840 YP_007801372.1 Sugar transferases involved in lipopolysaccharide synthesis VFG1369 Protein 5e-46 63
FPR_28840 YP_007801372.1 Sugar transferases involved in lipopolysaccharide synthesis VFG1309 Protein 2e-37 47