Gene Information

Name : EC1_05790 (EC1_05790)
Accession : YP_007797818.1
Strain : Eubacterium cylindroides T2-87
Genome accession: NC_021019
Putative virulence/resistance : Resistance
Product : ABC-type antimicrobial peptide transport system, ATPase component
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 552009 - 552710 bp
Length : 702 bp
Strand : -
Note : -

DNA sequence : 
ATGGGAATGATACTTGCAAAAAATGTTTCAAAAATTTATGAAACTGGCTCAAAAAAAACTTATGCTTTGAGTGATGTTTC
CTTTGAAATTGACAAAGGAGAATTTGTGGTGATTTTAGGACAGTCGGGAGCTGGAAAAAGCACCTTATTAAATATCTTAG
GTGGAATTGACTCTTTAAGTACTGGAGAAGTAATCGTTAATGACAGTCCCCTTTCAAAAATGAAAGAAAATGAATTAGCT
GAATATAGAGCAAAAGAAATTGGATTTATCTTTCAATTCTATAATCTTATTCCGACTTTAACAGTATATGAAAATGTTGC
ATTGATGAAAGATATTAAAGATGACATTCTCAATCCAATAACTATATTAGAACGTGTTGGGCTGAAAAACCATGTAAAGA
AATTTCCTAATCAGTTATCTGGCGGTGAACAGCAAAGAGTATCTATTGCTAGAGCTATTACAAAAAATCCAGAAATATTA
TTGTGTGATGAGCCAACAGGTGCTTTGGATAGCGAAACAGGTTGTAAGGTTTTACAGCTTATTCAAGATGTTTGCCGAGA
ATTTCAAAAAACAGTAATTATCGTAACTCATAATTCCAATATAGCAAAAGTGGCTGATAAGGTAATTCGATTAAAAAATG
GAAAAATTTTGGAAATATCACTTAATGATAGTCCAGCAGATATAAAGGAAGTGGAATGGTAA

Protein sequence : 
MGMILAKNVSKIYETGSKKTYALSDVSFEIDKGEFVVILGQSGAGKSTLLNILGGIDSLSTGEVIVNDSPLSKMKENELA
EYRAKEIGFIFQFYNLIPTLTVYENVALMKDIKDDILNPITILERVGLKNHVKKFPNQLSGGEQQRVSIARAITKNPEIL
LCDEPTGALDSETGCKVLQLIQDVCREFQKTVIIVTHNSNIAKVADKVIRLKNGKILEISLNDSPADIKEVEW

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-32 41
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 1e-32 41
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-32 41
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-31 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
EC1_05790 YP_007797818.1 ABC-type antimicrobial peptide transport system, ATPase component NC_012469.1.7685735. Protein 5e-53 51
EC1_05790 YP_007797818.1 ABC-type antimicrobial peptide transport system, ATPase component CP001581.1.gene598.p Protein 7e-46 43
EC1_05790 YP_007797818.1 ABC-type antimicrobial peptide transport system, ATPase component NC_012469.1.7686946. Protein 1e-22 42