Gene Information

Name : EC1_05700 (EC1_05700)
Accession : YP_007797811.1
Strain : Eubacterium cylindroides T2-87
Genome accession: NC_021019
Putative virulence/resistance : Unknown
Product : Site-specific recombinase XerD
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 544976 - 546172 bp
Length : 1197 bp
Strand : -
Note : -

DNA sequence :
ATGTCTAATGTAAAGAGAAAAGACAGCAAGGGACGCAATTTACGACTTGGAGAGAGCCAGAGAAAAGACGGAAGATACGT
TTACAAATATACCGATATGTATGAGCAACCACAGTTTGTCTATGCTTGGAAACTCGTTCCGACAGACAAGACACCCGCTG
GGAAACGTGAAGATTTGTCATTGAGGGAAAAGCAGAAAAAGATTAAGAAAGACCTCGACGACGGTATCAATACCATAGGT
GGGAAAATGACAGTCTGCCAGCTCTACGCAAAGAAGAACAGCCAGAGAAAAAATGTGAAACGCAACACAGAAAAAGGTCG
CCAGTATCTTATGAAAATTCTGGAAAACGACCCGCTGGGTGCAAGGAGCATTGATACGGTGAAGCTATCGGATGGTAAGG
AATGGGCTATGCGAATGTATGAGAATGGCTTTTCCTACAAGACGATTAGCAACTACAAGCGTTCTCTGAAAGCGTCATTC
TATATGGCGATTGAGGACGACTGTATCAGAAAAAATCCTTTTAACTTCAAATTGAGCGACGTTCTGGAAGATAATTCAGA
ACCCAAAGTCATTCTCACGCCAGAGCAGGAAGAAAAAATGCTTGCCTTTATGGAACAGGACAAGACGTACAGTAAGTATT
ATGATGAAGTGGTTATTCTTCTGGAAACGGGGCTTCGTATCTCTGAATTTTGCGGTCTGACAATCCATATAGATATGGCA
AACCGTATCATCAATGTAGACCACCAGCTATTGAAAGATACTGAAATCGGCTACTACATTGAAACACCTAAGACCAAAAA
AGGAGAACGCCAGCTTCCAATGACAGAAAGAGCCTATCAAGCCTTTAAGCGAGTGTTACAGAACAGAGGAAAGGCAGAGC
CTATCGTTATCAATGGTTACAGCAATTTCCTGTTCCTAAACCAAAAGGGCTTCCCTAAAGTGGCTGGTAACTATGTAAGT
ATGTTGCGTGGGCTTGTGAAGAAATATAACAAGACACATAAAGACCAGCTACCAAACATCACACCGCACTCATTCAGACA
TACCTACTGCACGAACATGGCAAACAAAGGAATGAACCCGAACACCCTACAATACATCATGGGACATTCAAACATCACCA
TGACATTAGGGTACTACGCACACGGTACTTTCAATTCAGCAAAAGCAGAACTTGAAAGACTGGCTCTTGCTTCTTAA

Protein sequence :
MSNVKRKDSKGRNLRLGESQRKDGRYVYKYTDMYEQPQFVYAWKLVPTDKTPAGKREDLSLREKQKKIKKDLDDGINTIG
GKMTVCQLYAKKNSQRKNVKRNTEKGRQYLMKILENDPLGARSIDTVKLSDGKEWAMRMYENGFSYKTISNYKRSLKASF
YMAIEDDCIRKNPFNFKLSDVLEDNSEPKVILTPEQEEKMLAFMEQDKTYSKYYDEVVILLETGLRISEFCGLTIHIDMA
NRIINVDHQLLKDTEIGYYIETPKTKKGERQLPMTERAYQAFKRVLQNRGKAEPIVINGYSNFLFLNQKGFPKVAGNYVS
MLRGLVKKYNKTHKDQLPNITPHSFRHTYCTNMANKGMNPNTLQYIMGHSNITMTLGYYAHGTFNSAKAELERLALAS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
int YP_008394266.1 integrase Not tested Not named Protein 1e-133 68
SSU05_0917 YP_001198283.1 Tn916, transposase Not tested 89K Protein 2e-136 68
SSU98_0923 YP_001200481.1 Tn916, transposase Not tested 89K Protein 2e-136 68