Gene Information

Name : EC1_04660 (EC1_04660)
Accession : YP_007797749.1
Strain : Eubacterium cylindroides T2-87
Genome accession: NC_021019
Putative virulence/resistance : Resistance
Product : small GTP-binding protein domain
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 438576 - 440495 bp
Length : 1920 bp
Strand : -
Note : -

DNA sequence :
ATGAAAATAATTAACTTAGGCATTCTGGCTCACGTTGACGCAGGAAAGACAACATTAACGGAGAGTTTATTGTATACCAG
TGGTGCAATTGCAGAACCAGGGAGCGTAGATAAAGGCACAACAAGGACAGATACAATGAATTTGGAGCGTCAAAGGGGAA
TCACTATCCAGACAGCAGTGACATCTTTTCAGTGGGAGGATGTAAAAGTCAACATTATAGATACGCCAGGCCATATGGAT
TTTTTGGCGGAAGTATACCGTTCTTTATCCGTATTAGACGGAGCAGTATTATTAGTTTCTGCAAAGGATGGCATACAGGC
ACAGACCCGTATACTGTTTCATGCACTACAGACAATGAAGATTCCGACAATTTTTTTCATCAATAAAATTGACCAAGAGG
GGATTGATTTGCCAATGGTATATCAAGAAATGAAAGCAAAGCTTTCTTCGGAAATTATAGTGAAGCAAAAGGTTGGGCAG
CATCCTCATATAAATGTAACGGACAATGACGATATGGAACAGTGGGATGCGGTAATTATGGGAAACGATGAACTATTAGA
GAAATATATGTCAGGGAAACCGTTTAAAATGTCAGAACTGGAACAGGAAGAAAACAGGAGATTCCAAAACGGAACGTTAT
TTCCCGTTTATCACGGAAGCGCTAAAAACAATCTGGGGATTCGGCAGCTTATAGAAGTGATTGCCAGTAAGTTTTATTCA
TCAACGCCTGAAGGTCAATCTGAACTATGCGGGCAGGTTTTTAAGATTGAATATTCAGAGAAAAGGCGGCGTTTTGTTTA
TGTGCGTATATATAGCGGAACATTGCATTTGAGGGATGTTATTAAAATATCTGAAAAAGAGAAAATAAAAATCACAGAGA
TGTGTGTTCCGACAAACGGTGAATTATGTTCATCCGATACAGCCTGCTCTGGTGATATTGTAATTTTACCAAATGATGTT
TTGCAGCTAAACAGTATTTTGGGGAACGAAATGCTGTTGCCGCAGAGAACATTTATTGAAAATCCTCTCCCTATGCTCCA
AACAACGATTGCAGCAAAGAAATCTGAACAGCGGGAAATATTGCTTGGGGCACTTACAGAAATTTCAGATGGCGACCCTC
TTTTAAAATATTATGTGGATACTACAACGCATGAGATTATACTTTCTTTTTTGGGGAAAGTGCAGATGGAAGTCATTTGT
GCCATCCTTGAGGAAAAATATCATGTGGAGGCAGAAATAAAAGAGCCTACTGTTATATATATGGAAAGACCGCTTAGAAA
AGCAGAATATACCATCCACATAGAAGTCCCGCCAAATCCTTTCTGGGCTTCTGTCGGGTTGTCCATAGAGCCGCTCCCTA
TTGGAAGTGGAGTGCAGTATGAAAGCAGAGTTTCACTTGGATATTTAAACCAATCGTTCCAAAATGCGGTTATGGAGGGG
GTTCTTTATGGCTGCGAGCAGGGGCTGTATGGATGGAAAGTGACAGACTGTAAAATCTGTTTTGAATATGGATTGTATTA
TAGTCCTGTAAGTACCCCCGCAGACTTTCGGCTGCTTTCCCCTATCGTATTGGAGCAGGCTTTAAAAAAAGCAGGGACAG
AACTATTAGAGCCATATCTCCACTTTGAAATTTATGCACCGCAGGAATATCTCTCACGGGCGTATCATGATGCTCCAAGG
TATTGTGCAGATATTGTAAGTACTCAGATAAAGAATGACGAGGTCATTCTGAAAGGAGAAATCCCTGCTAGATGTATTCA
AGAATACAGGAACGATTTAACTTATTTCACAAATGGGCAGGGAGTCTGCTTGACAGAGTTAAAAGGATACCAGCCAGCTA
CTGGTAAACTTATTTGCCAACCCCGCCGCCCGAATAGCCGTATAGATAAGGTTCGGCATATGTTCCACAAGTTAGCCTAA

Protein sequence :
MKIINLGILAHVDAGKTTLTESLLYTSGAIAEPGSVDKGTTRTDTMNLERQRGITIQTAVTSFQWEDVKVNIIDTPGHMD
FLAEVYRSLSVLDGAVLLVSAKDGIQAQTRILFHALQTMKIPTIFFINKIDQEGIDLPMVYQEMKAKLSSEIIVKQKVGQ
HPHINVTDNDDMEQWDAVIMGNDELLEKYMSGKPFKMSELEQEENRRFQNGTLFPVYHGSAKNNLGIRQLIEVIASKFYS
STPEGQSELCGQVFKIEYSEKRRRFVYVRIYSGTLHLRDVIKISEKEKIKITEMCVPTNGELCSSDTACSGDIVILPNDV
LQLNSILGNEMLLPQRTFIENPLPMLQTTIAAKKSEQREILLGALTEISDGDPLLKYYVDTTTHEIILSFLGKVQMEVIC
AILEEKYHVEAEIKEPTVIYMERPLRKAEYTIHIEVPPNPFWASVGLSIEPLPIGSGVQYESRVSLGYLNQSFQNAVMEG
VLYGCEQGLYGWKVTDCKICFEYGLYYSPVSTPADFRLLSPIVLEQALKKAGTELLEPYLHFEIYAPQEYLSRAYHDAPR
YCADIVSTQIKNDEVILKGEIPARCIQEYRNDLTYFTNGQGVCLTELKGYQPATGKLICQPRRPNSRIDKVRHMFHKLA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
tetO AFJ97266.1 truncated tetracycline resistant protein Not tested Not named Protein 0.0 97
SSU05_0922 YP_001198287.1 translation elongation factor (GTPases) Not tested 89K Protein 0.0 78
SSU98_0928 YP_001200485.1 translation elongation factor (GTPases) Not tested 89K Protein 0.0 78
tet(W) YP_005160006.1 tetracycline resistance protein Not tested Not named Protein 0.0 68

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
EC1_04660 YP_007797749.1 small GTP-binding protein domain AJ295238.gene.p01 Protein 0.0 80
EC1_04660 YP_007797749.1 small GTP-binding protein domain AM180355.1.gene636.p Protein 0.0 78
EC1_04660 YP_007797749.1 small GTP-binding protein domain X04388.gene.p01 Protein 0.0 78
EC1_04660 YP_007797749.1 small GTP-binding protein domain M85225.gene.p01 Protein 0.0 77
EC1_04660 YP_007797749.1 small GTP-binding protein domain NC_002758.1120355.p0 Protein 0.0 76
EC1_04660 YP_007797749.1 small GTP-binding protein domain NC_009782.5559075.p0 Protein 0.0 76
EC1_04660 YP_007797749.1 small GTP-binding protein domain L09756.gene.p01 Protein 0.0 72
EC1_04660 YP_007797749.1 small GTP-binding protein domain AY485126.gene.p01 Protein 0.0 70
EC1_04660 YP_007797749.1 small GTP-binding protein domain DQ294299.gene.p01 Protein 0.0 68
EC1_04660 YP_007797749.1 small GTP-binding protein domain AJ222769.gene.p01 Protein 0.0 68
EC1_04660 YP_007797749.1 small GTP-binding protein domain FN594949.1.gene24.p0 Protein 0.0 68
EC1_04660 YP_007797749.1 small GTP-binding protein domain AJ514254.gene.p01 Protein 4e-115 44
EC1_04660 YP_007797749.1 small GTP-binding protein domain L42544.gene.p01 Protein 1e-117 44
EC1_04660 YP_007797749.1 small GTP-binding protein domain Z21523.gene.p01 Protein 2e-102 41