Gene Information

Name : EC1_20010 (EC1_20010)
Accession : YP_007798797.1
Strain : Eubacterium cylindroides T2-87
Genome accession: NC_021019
Putative virulence/resistance : Unknown
Product : Site-specific recombinase XerD
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1858175 - 1859368 bp
Length : 1194 bp
Strand : -
Note : -

DNA sequence :
ATGAAAGAAAAAAGACGGGATAGCAAAGGACGTATCTTGCATACTGGAGAGAGCCAACGAACAGACGGAAAATACTTATA
TAAATATGTGGACGCATTTGGAAACACAAAATATGTGTATGCTTGGAGATTGACACCCACAGACCCGACACCAAAGGGAA
AACGGGAAAAACCCTCACTTCGTGAACTGGAACAGCAGATAAGACGGGATATTGAGGACGGTATCGACAGCACAGGCAAG
AAAATGACGCTTTGCCAACTCTACGCCAAACAGAACGCACAGAGGGCAAACGTGAAGAAAAGCACACAGAAACAACGGGA
ACAGCTCATGCGGTTATTGAAAGAGGACAAGTTAGGTGCTAGGAGCATTGATACGATAAAACCCTCTGACGCTAAGGAAT
GGGCGTTACGCATGAAAGACAAAGGCTTTTCCTATAACACCATTAACAACCATAAACGCTCGTTAAAAGCGTCATTCTAT
ATCGCCATACAAGACGATTGTGTAAGGAAAAACCCTTTTGATTTCAAGTTGAGTGAAGTCCTAGAAAATGATACCAAAGA
GAAAGTCGCATTGACAGAGGAACAGGAACTAGCCCTACTCTCATTCATCAAGACGGACAATGTGTATCACAAGTATTATG
ATGATGTGCTGATACTGTTAAAGACAGGACTTCGTATCTCGGAACTGTGCGGACTGACAATCATGGACGTTGATTTTATC
CATGAGGTTGTAGTTATCGACCACCAGTTACTAAAGAGCAAGGAACAAGGTTATTATATTGAAACGCCTAAGACAAAAAG
CGGAACAAGGCAAGTGCCATTAAGCAAGGAAACGATACAAGCATTTCAACGGGTTATGAAGAAACGCCCAAAGGCAGAAC
CATTTGTGATAGATGGACGGGGCAACTTCCTATTTGTCAATCAGAAAGGCAAGCCCAAAGTTGCGATTGATTACAATATG
CTTTTTGTCCGTATGGTAAAGAAATACAACAAGCACCATAAGGATAACCCTTTGCCACATATCACACCGCATACGCTACG
CCATACATTCTGCACAAGATTGGCAAGCAAGAACATGAACCCGAAAGATTTACAGTATATCATGGGACATTCAAATATCA
GTATCACAATGAACTGGTATGCTCATGCGTCCATAGATACTGCAAAATCAGAGGTTCAGCGTTTAATCGCATAG

Protein sequence :
MKEKRRDSKGRILHTGESQRTDGKYLYKYVDAFGNTKYVYAWRLTPTDPTPKGKREKPSLRELEQQIRRDIEDGIDSTGK
KMTLCQLYAKQNAQRANVKKSTQKQREQLMRLLKEDKLGARSIDTIKPSDAKEWALRMKDKGFSYNTINNHKRSLKASFY
IAIQDDCVRKNPFDFKLSEVLENDTKEKVALTEEQELALLSFIKTDNVYHKYYDDVLILLKTGLRISELCGLTIMDVDFI
HEVVVIDHQLLKSKEQGYYIETPKTKSGTRQVPLSKETIQAFQRVMKKRPKAEPFVIDGRGNFLFVNQKGKPKVAIDYNM
LFVRMVKKYNKHHKDNPLPHITPHTLRHTFCTRLASKNMNPKDLQYIMGHSNISITMNWYAHASIDTAKSEVQRLIA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SSU05_0917 YP_001198283.1 Tn916, transposase Not tested 89K Protein 7e-125 64
SSU98_0923 YP_001200481.1 Tn916, transposase Not tested 89K Protein 7e-125 64
int YP_008394266.1 integrase Not tested Not named Protein 3e-130 62