Gene Information

Name : EC1_17240 (EC1_17240)
Accession : YP_007798620.1
Strain : Eubacterium cylindroides T2-87
Genome accession: NC_021019
Putative virulence/resistance : Virulence
Product : Lysyl-tRNA synthetase (class II)
Function : -
COG functional category : -
COG ID : -
EC number : 6.1.1.6
Position : 1594015 - 1595964 bp
Length : 1950 bp
Strand : -
Note : -

DNA sequence :
ATGGAAAAATTAACTGAACAGGAAAAAGTGCGTCGCCAGAAGATGCAGGATCTTCAAGACATGGGAATCGATCCATTTGG
AAAGCGTTATGATCGCACAACAACTTCTGGAAAAATCGTTGAAGCGTATGAAAACTGCACAAAAGAAGAACTTCAGGAAA
AAGAAGTACACGTAAAAGTGGCAGGACGCATCATGACCAAACGCCGTCAGGGGAAAGCTGGTTTCATGCATATCCAGGAT
GTGGATGGACAGATCCAGATTTATGTACGTAAAGATGTAATTGGTGATGATCAATATGAAATCTTTAAGAAAAATGACAT
TGGAGATATCGTAGGTATCGAAGGAACAGTCATGAAAACGGACCATGGCCAGTTATCTGTTCGTGCGCAGGTATATACAC
ACTTATCTAAATCTTTAAGACCATTGCCAGAAAAATTCCATGGTTTAACTGATGTAGAAGAGCGTTATCGTCGTCGTTAT
GTAGATTTGATCATGAATCCAGAGGCAAAACATATTGCCTTAACACGACCAAAAATTATTCGTGCCATTCAACATTATTT
AGATGGTCAAGGTCTTGTAGAAGTGGAAACACCAGTATTGCAGCCTATTTTAGGCGGGGCTAGTGCTAGACCATTTGTGA
CACATCACAATACTTTAGATATGGATTTCTATATGCGAATAGCAACAGAATTACCATTAAAACGTTTGATCGTTGGTGGT
TTGGAAGGTGTTTATGAAATTGGACGTTTATTCCGTAATGAAGGAATGGATGCAATGCATAACCCTGAATTTACAACAGT
AGAAGCCTATGTAGCCTATAGTGATCTATATGGTATGATGGATCTGATTGAAGGATTGTTTGATTCTGTTGCCAATGAAG
TATTAGGTACAACAGAAATTACATATCAAGGGCAACAGCTATCTTTAAAAGCACCATTTAAACGAATTCACATGGTGGAT
GCGATCAAAGAAGCCTGCGGAGTTGATTTCTGGAAAGAAATGACTTTGGATGAAGCCAAAGCACTTGCTAAAGAACATGA
TATTGAAGTCGAAAAAATCCATAACTCTGTTGGACATATCATCAACTTATTCTTTGAAAAATATGTAGAAGAAACAATTG
TTCAGCCTACATTTGTATATGGGCATCCTACAAGTATTTCGCCGCTTGCCAAAAAGAATGCAGAGGATCCTCGTTTTGCC
GATCGCTATGAATTATTCATCTGTGGACATGAATATGCGAATGCATTCTCTGAGTTAAATGATCCAATCGATCAAAGACA
GCGCTTTGAAAAACAGTTGGAGCTAAGAGAACTTGGAGATGATGAAGCCAACGAAGTCGATACAGATTATGTAGAAGCAT
TGGAATATGGCATGCCTCCTACTGGTGGTGTAGGGCTTGGAATTGACCGCTTTGTGATGTTGTTGACAGATCAGAGAACA
ATTCGTGAAGTCTTATTGTTCCCACATATGAAGCTGACAAAAGATTCTAAAAAAGCTAACAAGACAAAAATGGAGGCACC
TGTTAAAACAAGTACACCTGCATCTTCAGAAGTAGTTAACAAGATTCCAACGATTGATTATTCAAAAGTAGAAATTGAAC
CTTTATTCAAAGATTTCGTTGATTTTGAAACATTCTCTAAATCAGACTTTAGAGCTGTAAAGGTAAAAGAATGTCGTGCT
GTTCCAAAGAGCAAGAAGTTATTAGAATTCATCTTGGATGATGGAACAGGAGAAGATAGAACGATCTTAAGCGGTATCCA
TGACTATTATGAACCTGAAGAACTAGTTGGAAAAACATTGATTGCAATCGTCAATTTACCACCAAGAAAAATGATGGGAA
TTAATTCTTGTGGCATGATCATTTCAGCAATTCATCAGGAAGAAGGCCAGGAACGTTTGAACCTTTTGATGGTAGATGAT
GCTATTCCTGCGGGAGCTAAATTGTACTAA

Protein sequence :
MEKLTEQEKVRRQKMQDLQDMGIDPFGKRYDRTTTSGKIVEAYENCTKEELQEKEVHVKVAGRIMTKRRQGKAGFMHIQD
VDGQIQIYVRKDVIGDDQYEIFKKNDIGDIVGIEGTVMKTDHGQLSVRAQVYTHLSKSLRPLPEKFHGLTDVEERYRRRY
VDLIMNPEAKHIALTRPKIIRAIQHYLDGQGLVEVETPVLQPILGGASARPFVTHHNTLDMDFYMRIATELPLKRLIVGG
LEGVYEIGRLFRNEGMDAMHNPEFTTVEAYVAYSDLYGMMDLIEGLFDSVANEVLGTTEITYQGQQLSLKAPFKRIHMVD
AIKEACGVDFWKEMTLDEAKALAKEHDIEVEKIHNSVGHIINLFFEKYVEETIVQPTFVYGHPTSISPLAKKNAEDPRFA
DRYELFICGHEYANAFSELNDPIDQRQRFEKQLELRELGDDEANEVDTDYVEALEYGMPPTGGVGLGIDRFVMLLTDQRT
IREVLLFPHMKLTKDSKKANKTKMEAPVKTSTPASSEVVNKIPTIDYSKVEIEPLFKDFVDFETFSKSDFRAVKVKECRA
VPKSKKLLEFILDDGTGEDRTILSGIHDYYEPEELVGKTLIAIVNLPPRKMMGINSCGMIISAIHQEEGQERLNLLMVDD
AIPAGAKLY

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAD66193.1 putative lysil-tRNA synthetase LysU Not tested PAI III 536 Protein 8e-105 47

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
EC1_17240 YP_007798620.1 Lysyl-tRNA synthetase (class II) VFG1668 Protein 5e-105 47